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Blood, Vol. 92 No. 11 (December 1), 1998: pp. 4394-4403

Description and Targeted Deletion of 5' Hypersensitive Site 5 and 6 of the Mouse beta -Globin Locus Control Region

M.A. Bender, Andreas Reik, Jennie Close, Agnes Telling, Elliot Epner, Steven Fiering, Ross Hardison, and Mark Groudine

From the Fred Hutchinson Cancer Research Center, Seattle, WA; the Departments of Pediatrics and Radiation Oncology, University of Washington School of Medicine, Seattle, WA; the Department of Microbiology, Dartmouth Medical School, Hanover, NH; and the Department of Biochemistry and Molecular Biology, Pennsylvania State University, University Park, PA.

The most upstream hypersensitive site (HS) of the beta -globin locus control region (LCR) in humans (5' HS 5) and chickens (5' HS 4) can act as an insulating element in some gain of function assays and may demarcate a beta -globin domain. We have mapped the most upstream HSs of the mouse beta -globin LCR and sequenced this region. We find that mice have a region homologous to human 5' HS 5 that is associated with a minor HS. In addition we map a unique HS upstream of 5' HS 5 and refer to this novel site as mouse 5' HS 6. We have also generated mice containing a targeted deletion of the region containing 5' HS 5 and 6. We find that after excision of the selectable marker in vivo, deletion of 5' HS 5 and 6 has a minimal effect on transcription and does not prevent formation of the remaining LCR HSs. Taken together these findings suggest that the most upstream HSs of the mouse beta -globin LCR are not necessary for maintaining the beta -globin locus in an active configuration or to protect it from a surrounding repressive chromatin environment.


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