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NEOPLASIA
From the Division of Pathology and Laboratory Medicine
and the Departments of Biostatistics and Dermatology, University of
Texas MD Anderson Cancer Center, Houston.
Mycosis fungoides (MF) is a cutaneous T-cell lymphoma characterized
by multifocal disease and protracted clinical course. The few studies
that have assessed T-cell receptor (TCR) gene rearrangements (GRs)
present at different anatomic sites in MF have generally reported a
common clone. We used a previously validated 4-color polymerase chain
reaction (PCR) assay to assess the size and V-family usage of TCR- Mycosis fungoides (MF) is typically an indolent
CD4+ cutaneous T-cell lymphoma that usually presents with
patch-stage disease that can be controlled with topical therapies. A
subset of MF patients, however, develop rapidly progressive disease
characterized by large cutaneous tumors and/or extracutaneous spread.
The early identification of patients who will progress from patch-stage MF to aggressive disease is an important goal.
Although epidermotropism and atypia of lymphocytes remain the hallmarks
of MF, the presence of a clonal T-cell receptor (TCR) gene
rearrangement (GR) can support the diagnosis.1,2
Conventional polymerase chain reaction (PCR) methods to assess
clonality at the TCR- Only a few studies have determined the relationship between T-cell
clones present at different anatomic sites in patients with
MF.3-8 By comparing band size following multiplex TCR- Patient samples
Diagnosis of MF required the presence of an epidermotropic,
cytologically atypical CD4+ T-cell infiltrate, as outlined
in the World Health Organization classification of lymphoid
neoplasms.10 The National Cancer Institute
(NCI)-Navy classification was used to grade MF involvement in lymph
nodes, with minimal numbers of identifiable tumor cells indicated as
LN-1 or LN-2; partial involvement as LN-3; and complete effacement by
tumor as LN-4.10,11 Staging was determined in accordance
with the Mycosis Fungoides Cooperative Group criteria.11 Patients were classified in 2 categories according to their clinical status during follow-up: progressive disease or nonprogressive disease.
Progressive disease was defined by the following clinical criteria: (1)
skin disease unresponsive to external therapies (eg, nitrogen mustard,
psoralen and long-wave ultraviolet radiation) and requiring
systemic therapies, and/or (2) significant tumor dissemination to
extracutaneous sites such as blood or lymph nodes, and/or (3) death due
to disease. Four cases of chronic dermatitis were also included.
Comparisons of data were made using a one-tailed Wilcoxon-Mann-Whitney exact test. A logistic regression model was
employed for multivariable analysis.
Molecular analysis of the TCR- For the 4-color TCR- Following PCR, amplified products were denatured and separated by high-resolution capillary electrophoresis using the 310-Genetic Analyzer (PE/Applied Biosystems), as previously described.9 Fluorescence data were analyzed using GeneScan and Genotyper software (PE/Applied Biosystems). The PCR assay was performed for each case in triplicate, and only those cases with reproducible peaks in at least 2 determinations were considered as clonal GRs. For this study, a monoclonal pattern was defined as 1 or 2 clonal GR(s). Three or more clonal GRs that were reproducible, distinct, and quantifiable above the polyclonal background characterized an oligoclonal pattern. The sensitivity of this PCR technique was established by diluting DNA
extracted from Jurkat (lymphoblastic lymphoma) or Hut-78 (Sezary
syndrome) T-cell lines and mixing with DNA from a reactive lymph
node that served as a polyclonal T-cell control.9 In this assay, clonal TCR- DNA sequencing The amplification products in 10 cases were sequenced as previously described.9 In cases with only a single clonal GR, the PCR reaction mixture was directly sequenced. In cases with more than one clonal GR, PCR products were first separated by 7.5% polyacrylamide gel electrophoresis. Each band was then excised and DNA was extracted. Sequencing was done using the fluorescence dye terminator cycle method. NCBI Blast (National Center for Biotechnology Information Basic Local Alignment Search Tool) software was used to compare the sequence homology of the clones with TCR-
germline sequences. Sequence Navigator (PE/Applied Biosystems) software was used to compare the sequence homology between different clones.
Summary of analyzed cases Thirty-nine patients were studied, 19 men and 20 women, ranging in age from 9 to 73 years (average, 49 years) (Table 1). By TNM staging, 19 patients (54%) presented with patch or plaque-type cutaneous lesions (stages IA, IB, and IIA), whereas 20 (46%) also had cutaneous tumors and/or lymph node or visceral involvement (stages IIB and IV, respectively). The length of clinical follow-up ranged from 12 months to 32 years, with an average length of 8.6 years. The clinical outcome distribution of the patients at the last follow-up was as follows: 6 patients were in complete remission (CR), 26 were alive but not in CR (8 of those with minimal cutaneous disease, and 3 had progressive lymphoma), 6 had died of MF, and 1 had died of causes unrelated to MF.
GR patterns were classified as "clonal" if there were 1 or 2 dominant peaks above the polyclonal amplified background. Cases were
regarded as oligoclonal if there were 3 or more discrete peaks with no
dominant peak identified, and as negative when all 4 primer pairs
showed an absence of discrete, reproducible peaks. We considered that a
patient had a stable clonal pattern when the same size and family of
TCR- A total of 91 involved skin samples and 11 lymph node samples from 39 MF patients were analyzed. Histologic analysis of the skin samples showed low-grade patch or plaque lesions in 64, large-cell transformation (LCT) in 21, and tumor-stage disease without LCT in 6. The following patterns of lymph node involvement were observed: 1 LN-1, 1 LN-2, 2 LN-3, and 7 LN-4. The 4 skin samples analyzed from 4 patients with clinical findings of chronic dermatitis all showed small-cell lymphocytic infiltrates with no significant cytologic atypia. Overall, 36 of 39 patients had a detectable clonal TCR- Because each V Assessing the degree of clonal heterogeneity We first compared the TCR- clonal pattern in 41 MF skin samples
from 17 patients who had multiple biopsy specimens taken from different
involved sites on the same day. A common clonal TCR- GR was observed
in simultaneous skin samples from 11 patients (65%) (Figure
1). However, in 5 of these 11 patients,
additional nonshared and reproducible TCR- GRs were also noted. By
contrast, different clonal TCR- GRs were observed in simultaneous
specimens from 4 patients (24%) (Figure
2). In one patient, an initial set of 2 skin samples showed an identical clonal TCR- pattern, but a second
set of 2 skin samples obtained 12 years later showed a different but
reproducible clonal pattern. The biopsies from 2 MF patients did not
show a clonal TCR- GR in any analyzed samples.
We next compared the clonal TCR- One patient had concurrent skin samples from left and right thigh
lesions at the time of diagnosis displaying different clonal TCR-
Finally, we studied 11 patients who had lymph node and skin samples
morphologically involved by MF. In 8 patients (73%), identical clonal
TCR- Table 2 summarizes the overall occurrence
of clonal heterogeneity and clonal persistence in all skin and lymph
node samples studied. Thirty of the 36 patients (77%) with clonal GRs
had a common clone noted in multiple biopsies studied. However, in 9 of
these 30 patients, additional nonshared clonal GRs were also noted in
one or more samples. The remaining patients either had divergent
TCR-
Correlation of clonal patterns with clinical parameters Of the 17 patients with multiple concurrent biopsies from skin taken from different involved sites on the same day, 12 had evidence of progressive disease after a mean follow-up of 8 years, and 3 showed nonprogressive disease over a similar follow-up period. Two patients had no GR identified and were omitted from analysis. In this "concurrent biopsy" group, among the 12 patients with progressive disease, 10 showed multiple samples with a common GR and 2 showed different GRs. Of the 3 nonprogressing patients, 2 showed different GRs in the multiple concurrent biopsies and one had a common TCR- GR.
There was a statistically significant association between the finding
of an identical TCR- GR pattern in multiple concurrent
skin samples and clinical progression (P = .04).
However, there was no statistically significant correlation between the
TCR- clonal pattern of the sequential skin samples and
clinical progression. Multivariate regression analysis showed no
statistically significant association between the clinical variables of
presenting stage, age, or duration of disease and the clonal
pattern observed.
We describe here the use of a multicolor PCR method to follow more
accurately the clonal pattern in multiple MF samples from a given
patient over the course of disease. Using this assay, which allows
determination of both the particular V We have previously compared this 4-color PCR technique with
conventional PCR-DGGE methodology.9 In that study, we
concluded that the 4-color PCR assay is at least equivalent to
conventional PCR methods in its sensitivity. But more important, this
assay more readily detects differences in clones because of the more reproducible size determination of GRs possible with capillary electrophoresis, complemented by using different colors for each set of
V Only a few previous studies have considered the clonal relationship
between T cells present in different lesions of MF.3-8 In
the most complete conventional PCR-based study, Delfau-Larue et
al8 found identical clones in different lesions from the same patient. A few other studies have shown similar results; however,
in all of them the sample number was small and sequence confirmation of
clonal identity was not always done.3-7 An earlier study,
however, using restriction fragment length analysis of the
TCR- Several mechanisms might explain the occurrence of clonal heterogeneity
in patients with MF. Given the frequent history of chronic dermatitis
in these patients, it is likely that early lesions emerge from
polyclonal or oligoclonal activation of T cells. The role of certain
superantigens (eg, bacterial proteins) in driving this early
proliferation has been suggested.15 Independent outgrowth
of several clones at different sites might then occur after many years
of antigen stimulation. Persistence of any given clone could be
dependent on further oncogenic transformation and/or therapeutic
intervention. Topical or systemic treatments might preferentially
eradicate a fast-growing clone, with subsequent emergence of a minor
clone. Less likely, clonal heterogeneity could also be explained by the
evolution of subclones from the dominant T-cell clone by subsequent
rearrangements or deletions at the TCR locus. In this study, more than
90% of clinicopathologically defined MF patients studied had
identifiable TCR- Several groups have reported the use of simultaneous analyses of
TCR- In conclusion, the presence of a GR by PCR analysis of a single MF lesion may not be sufficient to establish the presence of a dominant and systemically disseminated clone, especially in those patients with early-stage disease. Thus, detailed clonal analysis of multiple sites shows promise as a tool for stratifying early-stage MF patients. We are currently doing prospective studies with long-term follow-up to assess the statistical power of this method for identifying those MF patients with a higher risk of disease progression.
We thank David Sanders for assistance with figure preparation.
Submitted July 23, 2001; accepted June 17, 2002.
Supported by research grant CA16672 awarded by the National Cancer Institute, Department of Health and Human Services.
The publication costs of this article were defrayed in part by page charge payment. Therefore, and solely to indicate this fact, this article is hereby marked "advertisement" in accordance with 18 U.S.C. section 1734.
Reprints: Dan Jones, Department of Hematopathology, Box 72, University of Texas MD Anderson Cancer Center, 1515 Holcombe Blvd, Houston, TX 77030; e-mail: dajones{at}mdanderson.org.
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© 2002 by The American Society of Hematology.
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