Blood online
Home About Blood Authors Subscriptions Permission Advertising Public Access contact us
 

 
Advanced
Current Issue
First Edition
Archives
Submit to Blood
Search
American Society of Hematology
Meeting Abstracts
Email Alerts
Blood, 15 January 2007, Vol. 109, No. 2, pp. 795-801.
Prepublished online as a Blood First Edition Paper on September 26, 2006; DOI 10.1182/blood-2006-06-027946.


This Article
Right arrow Abstract Freely available
Right arrow Full Text (PDF)
Right arrow All Versions of this Article:
blood-2006-06-027946v1
109/2/795    most recent
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Right arrow Citation Map
Services
Right arrow Email this article to a friend
Right arrow Similar articles in this journal
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Download to citation manager
Right arrow reprints & permissions
Right arrow Rights and Permissions
Citing Articles
Right arrow Citing Articles via HighWire
Right arrow Citing Articles via CrossRef
Right arrow Citing Articles via Google Scholar
Google Scholar
Right arrow Articles by He, Z.
Right arrow Articles by Russell, J. E.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by He, Z.
Right arrow Articles by Russell, J. E.
Related Collections
Right arrow Gene Expression
Right arrow Red Cells
Social Bookmarking
 Add to CiteULike   Add to Connotea   Add to Del.icio.us   Add to Digg   Add to Reddit   Add to Technorati  
What's this?

arrow to previous article Previous Article  |  Table of Contents  |  Next Article next article arrow

RED CELLS

Dynamic posttranscriptional regulation of {epsilon}-globin gene expression in vivo

Zhenning He1, and J. Eric Russell1,2,

1 Department of Medicine (Hematology-Oncology) and 2 Department of Pediatrics (Hematology), University of Pennsylvania School of Medicine, and The Children's Hospital of Philadelphia, PA


    Abstract
 Top
 Abstract
 Introduction
 Materials and methods
 Results
 Discussion
 References
 
Functional studies of embryonic {epsilon}-globin indicate that individuals with ß thalassemia or sickle cell disease are likely to benefit from therapeutic, transcriptional derepression of its encoding gene. The success of {epsilon}-globin gene-reactivation strategies, however, will be tempered by the stability that {epsilon}-globin mRNA exhibits in developmental stage-discordant definitive erythroid progenitors. Using cell culture and transgenic mouse model systems, we demonstrate that {epsilon}-globin mRNA is modestly unstable in immature, transcriptionally active erythroid cells, but that this characteristic has relatively little impact on the accumulation of {epsilon}-globin mRNA at subsequent stages of terminal differentiation. Importantly, the constitutive stability of {epsilon}-globin mRNA increases in transgenic mouse models of ß thalassemia, suggesting that {epsilon}- and ß-globin mRNAs are coregulated through a shared posttranscriptional mechanism. As anticipated, relevant cis-acting determinants of {epsilon}-globin mRNA stability map to its 3' UTR, consistent with the positioning of functionally related elements in other globin mRNAs. These studies demonstrate that posttranscriptional processes do not pose a significant practical barrier to {epsilon}-globin gene reactivation and, moreover, indicate that related therapeutic strategies may be particularly effective in individuals carrying ß-thalassemic gene defects.


    Introduction
 Top
 Abstract
 Introduction
 Materials and methods
 Results
 Discussion
 References
 
Human ß-like globins are encoded by 5 homologous genes (5'-{epsilon}-G{gamma}-A{gamma}-{delta}-ß-3') arranged in the order of their developmental expression. More than 200 gene mutations are known to adversely affect either the level or the function of the principal adult (ß) globin, resulting in significant morbidity and mortality worldwide.1 For example, individuals with severe deficits in ß-globin expression (ß thalassemia) exhibit profound anemia, hepatosplenomegaly, and delays in growth and development,2,3 whereas homozygotes for a single-nucleotide mutation resulting in a Glu->Val substitution at ß-globin codon 6 (sickle cell disease) display chronic hemolytic anemia and severe multiorgan damage.4 Although many of the phenotypical consequences of these gene defects can be mitigated by periodic erythrocyte transfusions or allogeneic bone marrow transplantation, neither therapy is universally available and both are attended by significant risk.57 Another therapeutic strategy pharmacologically derepresses developmentally silenced ß-like globin genes in terminally differentiating adult erythroid cells using hydroxyurea or any of several short-chain fatty acid derivatives. This approach can sometimes reactivate fetal {gamma}-globin expression to levels that are sufficiently high to ameliorate the sickle phenotype810 but are typically too low to benefit individuals with ß thalassemia.11 Importantly, the teratogenic, carcinogenic, and developmental risks of long-term therapy with these agents are still largely undefined. Despite important progress, then, safe and effective therapies for ß-globin gene disorders are still urgently needed.

The ß-globin gene cluster contains another developmentally silenced gene, {epsilon}-globin, whose expression is ordinarily limited to primitive nucleated erythroblasts in the blood islands of the embryonic yolk sac.2,3 Like the fetal {gamma}-globin genes, the embryonic {epsilon}-globin gene remains physically intact in definitive erythroid progenitors and is therefore available for therapeutic derepression. The potential value of this approach for ß thalassemia and sickle cell disease has been demonstrated by proof-of-principle studies carried out in vivo in disease-specific mouse models. In one study, enforced expression of human {epsilon}-globin protein in definitive erythrocytes restored viability to transgenic animals with homozygous, embryonic-lethal inactivation of their endogenous adult ß-globin genes, demonstrating the physiologic neutrality of an {epsilon}-for-ß substitution in heterotetrameric hemoglobin.12 A subsequent study demonstrated that coexpressed human {epsilon}-globin significantly improved the phenotypes of mouse models of sickle cell disease, suggesting a second therapeutic application for its targeted reactivation.13 Although demonstrating the therapeutic potential of embryonic {epsilon}-globin, neither study directly addressed fundamental questions concerning regulatory processes that may affect the expression of the native {epsilon}-globin gene in stage-discordant erythroid cells.

There is general consensus that {epsilon}-globin gene silencing in definitive erythroid cells is a consequence of transcriptional arrest. Studies conducted both in vitro14,15 and in transgenic mice1618 have identified a number of positive and negative transcriptional regulatory motifs within the approximate 200-bp {epsilon}-globin gene promoter that bind erythroid cell-restricted and -ubiquitous factors. Site-specific mutations in several of these motifs can reactivate {epsilon}-globin gene expression, indicating the importance that transcriptional controls play in regulating {epsilon}-globin gene expression and, in addition, illustrating the principle that developmental silencing of the structurally intact {epsilon}-globin gene is not irreversible.

The value of transcriptionally derepressed {epsilon}-globin genes in adults with defects in ß-globin gene expression, however, may be limited by poorly understood regulatory mechanisms that act on the mature {epsilon}-globin mRNA. For example, the benefits of even the most efficient transcriptional reactivation method will be negated in translationally active definitive erythroid cells if the encoded {epsilon}-globin mRNA is unstable. The current report investigates aspects of the posttranscriptional regulation of {epsilon}-globin gene expression that have direct relevance to its potential therapeutic application. First, a novel method is established that permits the relative stabilities of embryonic {epsilon}- and adult ß-globin mRNAs to be directly compared in erythroid-phenotype mouse erythroleukemia (MEL) and nonerythroid HeLa cells. Subsequent analyses demonstrate that the stability of {epsilon}-globin mRNA in undifferentiated definitive erythroid cells in vivo is sufficient to guarantee its high-level accumulation in translationally active cells at later stages of differentiation. The possibility that the human {epsilon}- and ß-globin mRNAs are coregulated by a common posttranscriptional mechanism is also investigated to determine whether the efficiency of {epsilon}-globin gene derepression might be enhanced in individuals with certain ß-thalassemic gene defects. A potential structural basis for this effect is then addressed in experiments carried out in cultured cells and in transgenic mice. In sum, these experiments indicate that the stability of {epsilon}-globin mRNA does not limit the value of {epsilon}-globin gene-reactivation strategies, and further suggest that relevant posttranscriptional mechanisms may provide a substantial therapeutic advantage to individuals with ß thalassemia in whom {epsilon}-globin gene expression is successfully derepressed. These data complement previous reports demonstrating that the biochemical properties of heterotetramers containing human {epsilon}-globin subunits are physiologically useful in adults,12,19 providing assurances that posttranscriptional events do not pose a significant barrier, and may even enhance, the therapeutic value of reactivated embryonic {epsilon}-globin.


    Materials and methods
 Top
 Abstract
 Introduction
 Materials and methods
 Results
 Discussion
 References
 
Recombinant DNA

The construction and validation of a human (h) ß-globin gene linked to a tetracycline-conditional regulatory element (TRE) is described elsewhere.20 A TRE-linked h{epsilon}-globin gene was constructed by sequential ligation of 3 DNA fragments, encompassing the full 1.6-kb transcribed region and 0.2 kb of contiguous 3'-flanking region, into the SacII-EcoRV site of pTRE-2 (BD Biosciences, San Jose, CA). Derivative TRE-linked h{epsilon}3'ß and hß3'{epsilon} genes were constructed by substituting polymerase chain reaction (PCR)–generated hß- and h{epsilon}-globin 3'UTRs and 1.6 or 0.2 kb of contiguous 3'-flanking regions, respectively, for the corresponding TRE-h{epsilon} and TRE-hß sequences. The integrity of each DNA construct was verified by restriction digest analysis and automated dideoxy sequencing.

Human transgenes

Transgenes that encode h{epsilon}- and hß-globin mRNAs are described elsewhere12,21; each is linked in its native orientation to a 6.5-kb DNA fragment derived from DNase I-hypersensitive sites 1-4 of the hß-globin locus control region (µßLCR).22 The µßLCR-linked transgenes encoding h{epsilon}3'ß and hß3'{epsilon} mRNAs are identical to the TRE-linked genes, except that both transgenes are flanked by identical ß-globin 5' and 3' flanking-region DNA.12,21

Animals

All animal studies were approved by the University of Pennsylvania Institutional Animal Care and Use Committee. The generation and validation of mice with germline integration of µßLCR-h{epsilon} and µßLCR-hß transgenes has previously been described.12,21 ClaI-EcoRV DNA fragments containing the µßLCR-h{epsilon}3'ß and µßLCR-hß3'{epsilon} DNAs were purified over an Elutip filtration column (Schleicher & Schuell, Keene, NH) and provided to the University of Pennsylvania Transgenic and Chimeric Mouse Facility for injection into B6SJLF1/J x B6SJLF1/J fertilized oocytes.23 Founder mice identified by PCR analysis of tail DNA were mated with CD-1 females or C57BL6 males (Jackson Laboratories, Bar Harbor, ME) to generate F1 progeny with germline transgene integration. Mice heterozygous for targeted knockout of adjacent ßMaj and ßMin genes (Hbbth-3 heterozygotes) were generously provided by O. Smithies (University of North Carolina, Chapel Hill, NC).24 Globin phenotypes of transgenic animals were established by Triton-acid-urea gel electrophoresis of hemolysates,25,26 which, in combination with known pedigrees, permitted the globin genotypes of complex transgenic-knockout mice to be deduced.

Marrow-reticulocyte assay

As previously described,21,27,28 bone marrow hematopoietic cells and peripheral blood reticulocytes are harvested from individual transgenic mice, and total RNA purified from each tissue using TRIzol reagent (Invitrogen, Carlsbad, CA). Levels of transgenic and control endogenous mouse (m) {alpha}-globin mRNAs are determined by RNase protection using corresponding [32P]-labeled antisense RNA probes (see "RNase protection analysis"). Protected probe fragments are resolved on a denaturing acrylamide/urea gel and band densities quantitated by PhosphorImager analysis. All assays are carried out under conditions of probe excess.

Cell culture studies

MEL cells expressing the tetracycline-regulated transactivator (tTA) protein were provided by S. A. Liebhaber (University of Pennsylvania, Philadelphia, PA).29 tTA-expressing HeLa cells were maintained in FBS-supplemented DMEM media as recommended by the manufacturer (BD Biosciences). The capacities of the derivative tTA-expressing MEL and HeLa cell lines to support doxycycline-conditional silencing of TRE-linked genes have been previously demonstrated.20,29 Transfections were carried out using 5 x 105 cells and 5 µg supercoiled DNA using Superfect reagent as recommended by the manufacturer (Qiagen, Valencia, CA). Doxycycline was added to a final concentration of 1 µg/mL when required.

RNase protection analysis

RNAs from mouse bone marrow and peripheral blood were purified as described12,21; RNAs from cultured cells were prepared using TRIzol reagent as recommended by the manufacturer (Gibco-BRL). The [32P]-labeled hß- and h{epsilon}-globin probes were transcribed in vitro from PCR-generated DNA templates using SP6 RNA polymerase (Ambion, Austin, TX). The 287-nucleotide (nt) ß-globin probe protects a 199-nt sequence of hß-globin mRNA exon 2, whereas the 317-nt {epsilon}-globin probe protects a 221-nt fragment of human {epsilon}-globin mRNA exon 2. A 313-nt probe protects 160-nt exonic fragment of hß-actin mRNA.20 A DNA template encoding an m{alpha}-globin mRNA probe has previously been described.21 Band intensities were quantitated from PhosphorImager files using ImageQuant software (Amersham Biosciences, Piscataway, NJ). The RNase protection analyses (RPAs) were carried out using previously described linearity controls.21

Metabolic labeling of reticulocytes

Unfractionated PBS-washed cells from heparin-anticoagulated whole blood were resuspended in 15 µL PBS containing 2 mg/mL dextrose and supplemented with 1.5 µL [35S]methionine (Amersham; 15 mCi/mL [555 MBq/mL], >1000 Ci/mmol [37 TBq/mmol]), and incubated and for 30 minutes at 37°C. Cells were washed in excess PBS, osmotically lysed in excess ddH2O, and clarified hemolysates resolved by Triton-acid-urea gel electrophoresis.25,26 PhosphorImager exposures were quantitated using ImageQuant software. Pulse-chase analyses used a 5-minute metabolic-labeling period, at which time cells were washed in PBS and resuspended in excess heparin-anticoagulated plasma from a nontransgenic donor mouse for defined intervals.


    Results
 Top
 Abstract
 Introduction
 Materials and methods
 Results
 Discussion
 References
 
Human {epsilon}- and ß-globin mRNAs exhibit dissimilar stabilities in cultured cells

The possibility that a transcriptionally derepressed h{epsilon}-globin gene can produce therapeutically beneficial levels of h{epsilon}-globin protein is critically dependent on the stability of its encoded mRNA in definitive erythroid cells. To address the extent to which successful reactivation of {epsilon}-globin gene transcription might be limited by posttranscriptional regulatory mechanisms, a novel transcriptional chase strategy was designed to establish the stabilities of globin mRNAs under a variety of informative experimental conditions. The approach capitalizes on the properties of derivative MEL cells that constitutively express the hybrid tTA transactivator. Although tTA constitutively activates the transcription of genes linked to a recombinant TRE, its activity is rapidly and efficiently inhibited in the presence of tetracycline or doxycycline. Consequently, the stabilities of mRNAs encoded by TRE-linked genes can be established by interval analysis of their levels in doxycycline-exposed tTA-expressing cells.20 For the current studies, 2 TRE-linked genes encoding full-length h{epsilon}- and hß-globin mRNAs were constructed and structurally verified (Figure 1A). These genes were cotransfected into fully characterized tTA-expressing MEL cells,29,30 and the relative levels of the encoded h{epsilon}- and hß-globin mRNAs established at defined intervals after doxycycline exposure using an RNase protection method. Triplicate analyses demonstrated a reproducible 30% reduction in h{epsilon}-globin mRNA, relative to hß-globin mRNA, following an 8-hour period of transcriptional silencing (Figure 1B-C). Parallel experiments in previously validated doxycycline-exposed nonerythroid tTA-expressing HeLa cells revealed a similar reduction in h{epsilon}-globin mRNA levels (Figure 1D-E). These results indicate potentially important differences in the posttranscriptional fates of h{epsilon}- and hß-globin mRNAs in definitive erythroid cells and additionally suggest that the relevant globin mRNA-stabilizing mechanisms are not erythroid cell-type restricted.


Figure 1
View larger version (51K):
[in this window]
[in a new window]

 
Figure 1. Human {epsilon}-globin and ß-globin mRNAs display different stabilities in cultured cells. (A) Structures of doxycycline-conditional genes encoding human {epsilon}- and ß-globin mRNAs. TRE-h{epsilon} and TRE-hß were constructed by inserting the full-length human {epsilon}-globin gene (gray) and ß-globin gene (black) into plasmid pTRE-2, immediately downstream of the TRE transcriptional control element (diagonal shading). Important structural features of both genes are indicated. (B) Representative transcriptional chase analysis of globin mRNA stability in erythroid cells. tTA-expressing MEL cells were cotransfected with TRE-h{epsilon} and TRE-hß and total RNA prepared at defined intervals following doxycycline (dox) exposure. Levels of h{epsilon}- and hß-globin mRNAs were determined by RPA using [32P]-labeled mRNA-specific probes. Aliquots containing 2- and 4-fold excess of the T = 0 sample were assessed in parallel to ensure assay linearity (lanes 2X and 4X). The interval after doxycycline exposure (top) and the positions of the protected h{epsilon}- and hß-probe fragments are indicated. (C) Human {epsilon}- and ß-globin mRNAs are differentially stable in erythroid MEL cells. The study described in panel B was performed in triplicate. The h{epsilon}/hß band intensities at defined intervals after doxycycline exposure were determined by PhosphorImager densitometry and average values plotted. A gray line emphasizes the temporal h{epsilon}/hß ratio that would be observed if the 2 mRNAs were equally stable. Error bars indicate 1 SD. (D) Representative transcriptional chase analysis of globin mRNA stability in nonerythroid cells. Total RNA from tTA-expressing HeLa cells that had been cotransfected with TRE-h{epsilon} and TRE-hß was analyzed as described in panel B. Linearity controls have been cropped to preserve image clarity. (E) Human {epsilon}- and ß-globin mRNAs are differentially stable in nonerythroid HeLa cells. The study described in panel D was performed in triplicate; average h{epsilon}/hß band intensities are plotted. Error bars indicate 1 SD.

 
The constitutive stability of h{epsilon}-globin mRNA in early erythroid progenitors minimally affects its accumulation in terminally differentiated reticulocytes

Although h{epsilon}- and hß-globin mRNAs are unequally stable in proerythroblast MEL cells, the effect of this difference on the accumulation of h{epsilon}-globin mRNA in translationally active cells at later stages of terminal differentiation is not known. Consequently, we elected to study the extent to which the constitutive stability of h{epsilon}-globin mRNA affects its accumulation over the full course of terminal differentiation. The experimental approach uses mice with h{epsilon}- and hß-globin transgenes linked to transcriptional control elements that ensure their high-level transcription in adult (definitive) erythroid cells12 (Figure 2A). A previously established method was adapted to assess the stability of h{epsilon}-globin mRNA (Figure 2B), which is defined as the proportion of h{epsilon}-globin mRNA originally present in murine marrow erythroid cells (largely proerythroblasts, basophilic erythroblasts, and polychromatophilic erythroblasts) that survives in circulating reticulocytes from the same animal.21,23 Analyses of 2 or more animals from each of 4 h{epsilon}-transgenic mouse lines demonstrated a stability for h{epsilon}-globin mRNA equal to about 60% of the value previously established for hß-globin mRNA under identical experimental conditions21 (Figure 2C). These studies indicate that the stability of an mRNA in early, transcriptionally active erythroid cells poorly predicts its overall accumulation in later stages of terminal differentiation, because the modest instability of h{epsilon}-globin mRNA in MEL cells seems to have little practical impact on its accumulation in cells corresponding to later stages of differentiation. Consequently, the constitutive stability of the h{epsilon}-globin mRNA does not appear to limit the utility of therapeutic approaches to h{epsilon}-globin gene reactivation in disorders of ß-globin gene expression.


Figure 2
View larger version (32K):
[in this window]
[in a new window]

 
Figure 2. Transgenic h{epsilon}-globin mRNA accumulates to high levels in vivo in intact mouse erythroid progenitors. (A) Structures of transgenes encoding h{epsilon}- and hß-globin mRNAs. µßLCR-h{epsilon} and µßLCR-hß contain the full-length transcribed regions of the h{epsilon}-globin gene (gray) and hß-globin gene (black), each identically flanked by DNA containing the hß-globin gene promoter and 3'-flanking region/enhancer. Both constructs are linked to a micro–ß-locus control region (µßLCR).22 (B) Analysis of h{epsilon}-globin mRNA stability in a representative mouse. Total mRNA was recovered from the bone marrow (B) and peripheral reticulocytes (R) of a representative h{epsilon} mouse and was subsequently subjected to RPA using [32P]-labeled h{epsilon}-globin and internal control m{alpha}-globin probes. The specificities of the m{alpha}-globin and h{epsilon}-globin antisense mRNA probes were demonstrated by parallel assay of reticulocyte RNA from a nontransgenic control mouse. (C) Transgenic h{epsilon}-globin mRNA is highly stable in terminally differentiating mouse erythroid cells. The average stability of h{epsilon}-globin mRNA in animals from each of 4 independent transgenic lines was determined as described in panel B. The average across all 4 lines (0.87 ± 0.52) is indicated by a gray line. Error bars represent 1 SD. The stability of h{epsilon}-globin mRNA is defined as (h{epsilon}/m{alpha})P/(h{epsilon}/m{alpha})B, where P and B indicate peripheral blood and bone marrow, respectively. The previously reported average stability of hß-globin mRNA derived from 5 transgenic lines ({image}; 1.47 ± 0.49) is summarized for comparison.21

 
The expression of h{epsilon}-globin in differentiating erythroid cells is dynamically regulated

The observed high-level stabilities of the evolutionarily related h{epsilon}- and hß-globin mRNAs suggested the possibility that the 2 mRNAs might be coregulated by a shared posttranscriptional mechanism. For example, the h{epsilon}- and hß-globin mRNAs might compete for an essential mRNA-stabilizing mechanism that is easily saturable. Because this possibility would have critical implications vis-à-vis the efficiency of {epsilon}-globin gene reactivation strategies—particularly in thalassemics with deficiencies in ß-globin mRNA—a functional screen for relevant regulatory relationships was developed. In vivo analyses were designed to assess whether the expression of transgenic h{epsilon}-globin is affected by the level of ß-globin gene expression in mature study animals. h{epsilon}-transgenic mice containing none, one, or 2 copies of a mß knockout allele (genotypes +/+/h{epsilon}, mß+/–/h{epsilon}, and mß–/–/h{epsilon}, respectively) were generated through iterative mating of h{epsilon} transgenics with mice containing heterozygous knockout of their endogenous adult mß-globin genes (Hbbth-3).24 Metabolic-labeling studies of anticoagulated whole blood from these animals revealed striking 3- and 9-fold increases in h{epsilon} expression in mß+/– and mß–/– mice, respectively, compared to its expression in mß+/+ animals, consistent with a predicted coregulatory activity affecting the expression of the 2 related genes (Figure 3A-B). This effect was observed in 2 different h{epsilon}-transgenic lines, suggesting that the relevant mechanism is independent of transgene integration-site effects. In addition, levels of [35S]methionine pulse-labeled h{epsilon}-globin remained stable in reticulocytes from mß+/– and mß–/– animals following a prolonged translational chase interval (Figure 3C-D), indicating that h{epsilon}-globin augmentation in thalassemic animals is not due to an increase in the stability of the h{epsilon}-globin protein. The results of these studies strongly suggest that coregulation is likely to affect the stability of the intact h{epsilon}-globin mRNA.


Figure 3
View larger version (51K):
[in this window]
[in a new window]

 
Figure 3. The expression of h{epsilon}-globin is up-regulated in mice with ß-globin gene defects. (A) Representative analyses of transgenic h{epsilon}-globin expression in nonthalassemic and thalassemic mice. Intact PBS-washed peripheral blood cells from h{epsilon}-expressing mice were incubated with [35S]methionine, hemolysates resolved on a Triton-acid-urea gel, and autoradiographs exposed. The mß-globin genotypes for mice from independent {epsilon}1 and {epsilon}2 transgenic lines are indicated at top (normal, +/+; heterozygous knockout, +/–; and homozygous knockout, –/–). Individual globins are identified to the left. (B) The expression of h{epsilon}-globin is induced in ß-thalassemic mice. The levels of h{epsilon} globin in individual mice, normalized to the levels of endogenous m{alpha} globin, are plotted (bullet). The average values for mice with either of 3 different mß-globin genotypes are indicated; error bars represent 1 SD. (C,D) Pulse-chase analyses of h{epsilon}-globin protein in nonthalassemic and thalassemic mice. [35S]methionine-labeled peripheral blood cells from h{epsilon}-expressing mice were washed, then resuspended in nonisotopic media for defined intervals (indicated). Hemolysates were resolved by Triton-acid-urea electrophoresis, and the ratios of the h{epsilon} and m{alpha} band intensities plotted. The mß-globin genotypes of animals used in each study are indicated.

 
The stability of h{epsilon}-globin mRNA increases in mice with defective ß-globin gene expression

Evidence indicating that ß-globin expression alters neither the transcription of the h{epsilon} transgene nor the stability of its encoded protein suggested the existence of a posttranscriptional process that coregulates the stabilities of the h{epsilon}- and hß-globin mRNAs. To address this possibility, mRNA stability studies were carried out in complex transgenic-knockout mß+/+/h{epsilon}, +/–/h{epsilon}, and mß–/–/h{epsilon} mice. The results of these experiments revealed a clear relationship between h{epsilon}-mRNA survival and the number of intact mß-globin alleles; the stability of h{epsilon} mRNA increased 2- and 6-fold in +/– and mß–/– animals, respectively, relative to its value in mß+/+ animals (Figure 4A-B). A corresponding prediction, that ß-globin gene overexpression would reduce h{epsilon}-globin mRNA stability, was tested by similar studies of h{epsilon}-transgenic mice that did or did not coexpress an independent hß-globin transgene. Metabolic-labeling experiments demonstrated a 3-fold decrease in h{epsilon}-globin synthesis in reticulocytes from hß-expressing transgenics (not shown), whereas marrow-reticulocyte mRNA analyses demonstrated a 2-fold reduction in the stability of h{epsilon} mRNA in 7 hß-expressing mß+/– animals (Figure 4C-D). These results substantiate the hypothesis that the stabilities of the hß- and h{epsilon}-globin mRNAs are likely to be coregulated through a shared mechanism. From a practical perspective, these data indicate that the physiologic effect of h{epsilon}-globin gene derepression would likely be accentuated in ß-thalassemic individuals who expressed low levels of functional ß-globin mRNA.


Figure 4
View larger version (48K):
[in this window]
[in a new window]

 
Figure 4. The stability of h{epsilon}-globin mRNA is enhanced in ß-thalassemic mice. (A) Representative analyses of transgenic h{epsilon}-globin mRNA survival in nonthalassemic and thalassemic mice. Bone marrow (B) and peripheral blood (P) from h{epsilon}-transgenic mice was subjected to RPA using [32P]-labeled h{epsilon}-globin and control m{alpha}-globin RNA probes. The mß-globin genotypes of individual animals are indicated. Mice were derived from 2 independent transgenic lines ({epsilon}1, {epsilon}2). (B) Increased survival of h{epsilon}-globin mRNA in ß-thalassemic mice. The results from replicate analyses described in panel A are illustrated; mRNA stability is defined in the legend to Figure 2C. Values from individual animals are plotted (bullet); bars indicate averages for animals with the stated mß-globin genotypes. (C) Representative analysis of transgenic h{epsilon}-globin mRNA survival in hß-expressing transgenic mice. RNAs from mß+/–/h{epsilon} mice that did (+) or did not (–) carry an hß transgene were studied as described in panel A. The positions of the protected probe fragments are indicated. (D) Decreased stability of h{epsilon}-globin mRNA in hß-expressing transgenic mice. The results from replicate analyses of mß+/–/h{epsilon} animals coexpressing an hß transgene are plotted individually (points) and averaged (sqdiagf). The value for h{epsilon} mRNA in mß+/–/h{epsilon} mice that do not express hß globin is reproduced from panel B (transgenic line e2).

 
The stability of h{epsilon}-globin mRNA is dictated by cis-acting elements within its 3'UTR

We speculated that the stabilities of both the h{epsilon}- and hß-globin mRNAs might be mediated by related cis-acting determinants, including either of 2 structural elements that have been identified within the ß-globin 3'UTR.20,21 Sequence alignments, however, failed to reveal any clear similarities in the primary structures of the h{epsilon}- and hß-globin 3'UTRs (data not shown). Because mRNA-stability determinants can be highly degenerate, and therefore difficult to identify with certainty,27,31,32 a functional assay was designed to assess whether the stability of the h{epsilon}-globin mRNA is dictated by elements within its 3'UTR. TRE-linked h{epsilon}- and hß-globin genes were constructed that contained reciprocal exchanges of their 3'UTRs (Figure 5A); these genes were then cotransfected into tTA-expressing MEL cells and the relative stabilities of the encoded mRNAs assessed by doxycycline chase (Figure 5B). In contrast to the unequal stabilities of the parental h{epsilon}- and hß-globin mRNAs, the 2 chimeric mRNAs were equally stable in erythroid MEL cells (Figure 5C). Analyses in nonerythroid HeLa cells produced nearly identical results, validating earlier conclusions that this aspect of h{epsilon}- and hß-globin gene expression is not restricted to erythroid cells (Figure 5C,E). The physiologic importance of this effect was subsequently tested in mice expressing transgenes encoding the chimeric h{epsilon}3'ß-globin and hß3'{epsilon}-globin mRNAs (not illustrated). The mRNA stability analyses confirmed the importance of 3'UTR identity to globin mRNA accumulation during terminal differentiation; substitution of an {epsilon}-globin 3'UTR reduced hß-globin mRNA stability by more than 4-fold whereas, conversely, a substituted ß-globin 3'UTR augmented h{epsilon}-globin mRNA survival nearly to the level of full-length hß-globin mRNA (Figure 5F). These studies indicate the importance of the 3'UTR to the constitutive stabilities of the h{epsilon}- and hß-globin mRNAs and, in the setting of their common evolutionary heritage, suggest that the relevant structural determinants may be distantly related.


Figure 5
View larger version (37K):
[in this window]
[in a new window]

 
Figure 5. The stability of h{epsilon}-globin mRNA is dictated by determinants within its 3' UTR. (A) Structures of doxycycline-conditional genes encoding h{epsilon}- and hß-globin mRNAs with reciprocal exchange of their 3'UTRs. TRE-h{epsilon}3'ß and TRE-hß3'{epsilon} are identical to parental TRE-h{epsilon} and TRE-hß except for nucleotide-specific reciprocal exchange of their 3'UTRs. Structural elements derived from the h{epsilon}- and hß-globin genes are indicated in gray and black, respectively. The tTA-responsive TRE transcriptional control element is diagonally shaded. (B) Representative transcriptional chase analysis of chimeric globin mRNAs in erythroid cells. tTA-expressing MEL cells were cotransfected with TRE-h{epsilon}3'ß and TRE-hß3'{epsilon}, and RNAs collected at defined intervals after doxycycline exposure were assessed by a 2-probe RNase protection method. Linearity controls have been cropped to preserve image clarity. (C) h{epsilon}3'ß and hß3'{epsilon} are equally stable in erythroid MEL cells. The study described in panel B was performed in triplicate. The h{epsilon}3'ß/hß3'{epsilon} band intensities at defined intervals after doxycycline exposure were determined by PhosphorImager densitometry and average values plotted. The relative stabilities of the parental h{epsilon}/hß mRNAs have been reproduced from Figure 1 for comparison (gray line). Error bars indicate 1 SD. (D) Representative transcriptional chase analysis of chimeric h{epsilon}/hß-globin mRNAs in nonerythroid cells. tTA-expressing HeLa cells that were cotransfected with TRE-h{epsilon}3'ß and TRE-hß3'{epsilon} were analyzed as described in panel B. (E) The h{epsilon}3'ß-globin and hß3'{epsilon}-globin mRNAs are equally stable in nonerythroid HeLa cells. The study described in panel D was performed in triplicate and average band intensities plotted. A gray line indicates the relative stabilities of the parental h{epsilon}/hß mRNAs previously established in Figure 1. Error bars indicate 1 SD. (F) The relative stabilities of h{epsilon}- and hß-globin mRNAs in intact erythroid cells in vivo are dependent on elements within their 3'UTRs. The stabilities of h{epsilon}3'ß-globin and hß3'{epsilon}-globin mRNAs were determined in 3 or more mice from each of 2 hß3'{epsilon} and 4 h{epsilon}3'ß transgenic mouse lines (identified at bottom) using marrow-reticulocyte analysis. Vertical arrows indicate the difference between the average stabilities of the chimeric mRNAs (arrowhead) and the stabilities of hß- and h{epsilon}-globin mRNAs containing their native 3'UTRs (arrow tail).

 

    Discussion
 Top
 Abstract
 Introduction
 Materials and methods
 Results
 Discussion
 References
 
Detailed biochemical studies conclude that {epsilon}-globin subunits can incorporate into heterotetrameric hemoglobins exhibiting physiologically valid, therapeutically important characteristics. In vitro studies using hemoglobins expressed in yeast33 and in mammalian erythrocytes19 observe little practical difference between the O2-binding characteristics of Hb Gower-2 ({alpha}2{epsilon}2) and Hb A ({alpha}2ß2), including highly similar P50 values, Hill coefficients, Bohr properties, and 2,3-BPG–binding affinities. Parallel in vivo analyses demonstrate that expression of h{epsilon}-globin improves the phenotype in transgenic mouse models of thalassemia12 and sickle cell disease,13 confirming the therapeutic utility of h{epsilon}-globin expression in both disorders. These studies provide a clear rationale for aggressive investigation into the possibility that the developmentally silenced h{epsilon}-globin gene can be transcriptionally derepressed in disorders of ß-globin gene expression.

Generic gene-reactivation strategies for ß thalassemia and sickle cell disease, though, are predicated on the expectation that derepressed embryonic and fetal globin mRNAs will exhibit stabilities similar to those of adult ß-globin mRNA. This assumption is likely to be valid for fetal {gamma}-globin mRNA, which can be reactivated to high-level expression using several pharmacologic agents.810,34 The possibility that embryonic-stage h{epsilon}-globin mRNA will exhibit the necessary stability, however, is substantially more difficult to predict because there are no known human conditions, either constitutive or acquired, in which the h{epsilon}-globin mRNA is transcribed at physiologically relevant levels. The importance of assessing h{epsilon}-globin mRNA function is not trivial; the transcription of mRNAs that are either highly unstable or that encode dysfunctional globin subunits would negate many of the anticipated benefits of h{epsilon}-globin gene reactivation. Our analyses investigate this critical property of h{epsilon}-globin mRNA to ensure that it is compatible with the therapeutic targeting of its encoding gene for transcriptional reactivation.

The current studies demonstrate that h{epsilon}-globin mRNA is sufficiently stable to permit high-level expression of h{epsilon} globin in definitive erythroid cells. Differentiating definitive erythroid cells remain translationally active for several days after they are transcriptionally silenced, favoring the expression of genes, like those encoding hß and h{gamma} globin, that transcribe highly stable mRNAs. In contrast, the expression of h{epsilon} globin is normally restricted to transcriptionally active primitive erythroblasts35 in which the evolutionary benefits of high mRNA stability are less pronounced. Consequently, there is significant reason to query whether the stability of h{epsilon}-globin mRNA is sufficient to permit its high-level accumulation in developmental stage-discordant erythroid progenitors. These concerns are justified by studies demonstrating the relative instability of a related embryonic-globin mRNA ({zeta}-globin mRNA) when it is expressed in definitive mouse erythrocytes.23,27 Using a tetracycline-conditional expression system (Figure 1A) we demonstrate that h{epsilon}-globin mRNA is less stable than ß-globin mRNA in cultured MEL cells (Figure 1B-C). Although murine in origin, these erythropoietic cells are similar to human proerythroblasts in several respects and are consequently used to model early-stage definitive human erythroid progenitors.36 Unexpectedly, though, the impact of the stability difference between the 2 mRNAs over the full course of terminal differentiation is relatively small (Figure 2C). The basis for this paradox is not clear, although it seems reasonable to speculate that the stabilities of individual globin mRNAs are not fixed, but rather change as erythroid cells pass through successive stages of maturity. This possibility would account for the wide range of half-life values for adult {alpha}- and ß-globin mRNAs that have emerged from studies using experimental systems corresponding to different periods of terminal differentiation.3740 From a practical perspective, the observed (relative) instability of h{epsilon}-globin mRNA in immature erythroid cells has surprisingly little impact on its overall accumulation in more differentiated cells.

The accompanying observation that the h{epsilon}- and hß-globin mRNAs accumulate to nearly equal levels during the course of terminal differentiation may have important implications vis-à-vis the efficiency of gene reactivation approaches. Other globin mRNAs appear to be coregulated through related or identical posttranscriptional processes,20,21,27 providing a strong precedent for the hypothesis that ß-like mRNAs may share vestiges of a posttranscriptional regulatory mechanism that predates evolutionary divergence of the embryonic and adult ß-like globin genes. Our data indicate that this is likely to be the case, demonstrating that h{epsilon}-globin is expressed at significantly higher levels in ß-thalassemic animals than in nonthalassemic transgenic mice (Figure 3A-B). Two observations argue that this effect is not a consequence of transcriptional up-regulation. First, up-regulation is independent of transgene integration site and does not require physical proximity to the endogenous mouse ß-globin gene locus (data not shown). Second, levels of h{epsilon}-globin mRNA in transcriptionally active marrow erythroid cells (normalized for control m{alpha}-globin mRNA) are not materially increased in ß-thalassemic animals, seemingly inconsistent with a mechanism involving an increase in h{epsilon}-globin gene transcription (Figure 4A). Likewise, pulse-chase analyses indicate that compensatory up-regulation is not a consequence of alterations in the stability of h{epsilon}-globin subunits (Figure 3C-D). Additional studies did, however, demonstrate an unequivocal increase in the stability of h{epsilon}-globin mRNA in ß-thalassemic animals (Figure 4A-B), consistent with the hypothesis that the h{epsilon}- and hß-globin mRNAs are posttranscriptionally coregulated. These data suggest that the consequences of h{epsilon}-globin gene derepression will be highly leveraged in ß thalassemias that are characterized by reduced levels of ß-globin mRNA. A mechanistic arrangement of this type would also have an impact on the fundamental design of globin transgenes for human therapy to avoid competitive destabilization of their encoded mRNAs.

The nature of the elements that define the high stabilities of the h{epsilon}- and hß-globin mRNAs remain undefined, but are anticipated to be structurally related. Although strict homologies between the 3'UTRs of the 2 mRNAs were not observed, it is worth noting that h{epsilon}-globin mRNA contains a pyrimidine-rich track similar to one that is thought to stabilize the ß-globin mRNA.21 This track can be highly polymorphic, as evidenced by different forms in the 3'UTRs of the human27 and murine41 globin mRNAs, as well as several nonglobin mRNAs.31,32 As might be predicted, reciprocal exchange of this region results in a decrease in the stability of the hß-globin mRNA and a corresponding increase in the stability of the h{epsilon}-globin mRNA in both cultured cells and in transgenic mice (Figure 5). One future challenge will be to identify the nature of the site-specific mRNA stability elements in the h{epsilon}-globin 3'UTR and to determine how nucleotide differences affect the binding of trans-acting effector factors, as well as the overall stability of h{epsilon}-globin mRNA.


    Acknowledgments
 
The authors thank Dr Jia Yu for technical assistance, Dr Oliver Smithies for providing mß-knockout animals, and Dr Stephen A. Liebhaber for sharing tTA-expressing MEL cells.

This work was supported in part by National Institutes of Health grants HL-R01-061399 and HL-U54-070596.


    Footnotes
 
Submitted June 8, 2006; accepted August 23, 2006.

Prepublished online as Blood First Edition Paper, September 26, 2006 DOI: 10.1182/blood-2006-06-027946

Contribution: Z.H. performed experiments and analyzed data; and J.E.R. designed experiments, analyzed data, and wrote the manuscript.

The publication costs of this article were defrayed in part by page charge payment. Therefore, and solely to indicate this fact, this article is hereby marked "advertisement" in accordance with 18 USC section 1734.

Conflict-of-interest disclosure: the authors declare no competing financial interests.

Correspondence: J. Eric Russell,Abramson Research Building, Rm 316F, The Children's Hospital of Philadelphia, 34th St and Civic Center Blvd, Philadelphia, PA 19104; e-mail: jeruss{at}mail.med.upenn.edu.


    References
 Top
 Abstract
 Introduction
 Materials and methods
 Results
 Discussion
 References
 

  1. Modell B and Bulyzhenkov B. Distribution and control of some genetic disorders. World Health Stat Q 1988; 41:209–218.[Medline] [Order article via Infotrieve]

  2. Bunn HF and Forget BG. Hemoglobin: Molecular, Genetic, and Clinical Aspects. 1986;Philadelphia, PA Saunders.

  3. Russell JE and Liebhaber SA. Molecular genetics of thalassemia. In Verma RS (Ed.). Advances in Genome Biology1993;Greenwich, CT JAI Press Vol. 2: pp. 283–353.

  4. Bunn HF. Mechanisms of disease: pathogenesis and treatment of sickle cell disease. N Engl J Med 1997; 337:762–769.[Free Full Text]

  5. Giardina PJ and Grady RW. Chelation therapy in beta thalassemia: the benefits and limitations of desferrioxamine. Semin Hematol 1995; 32:310–312.

  6. Giardini C, Galimberti M, Lucarelli G. Bone marrow transplantation in thalassemia. Ann Rev Med 1995; 46:319–330.[CrossRef][Medline] [Order article via Infotrieve]

  7. Feitelson M, Lega L, Guo J, et al. Pathogenesis of posttransfusion viral hepatitis in children with beta thalassemia. Hepatology 1994; 19:558–568.[CrossRef][Medline] [Order article via Infotrieve]

  8. Charache S, Terrin ML, Moore RD, et al. Effect of hydroxyurea on the frequency of painful crises in sickle cell anemia. N Engl J Med 1995; 332:1317–1322.[Abstract/Free Full Text]

  9. Sher GD, Ginder GD, Little J, Yang S, Dover GJ, Olivieri NF. Extended therapy with intravenous arginine butyrate in patients with beta hemoglobinopathies. N Engl J Med 1995; 332:1606–1610.[Abstract/Free Full Text]

  10. Perrine SP, Ginder GD, Faller DV, et al. A short-term trial of butyrate to stimulate fetal-globin-gene expression in the beta-globin disorders. N Engl J Med 1993; 328:81–86.[Abstract/Free Full Text]

  11. Hajjar FM and Pearson HA. Pharmacologic treatment of thalassemia intermedia with hydroxyurea. J Pediatr 1994; 125:490–492.[CrossRef][Medline] [Order article via Infotrieve]

  12. Russell JE and Liebhaber SA. Reversal of lethal alpha- and beta-thalassemias in mice by expression of human embryonic globins. Blood 1998; 92:3057–3063.[Abstract/Free Full Text]

  13. He Z and Russell JE. A human embryonic hemoglobin inhibits Hb S polymerization in vitro and restores a normal phenotype to mouse models of sickle cell disease. Proc Natl Acad Sci U S A 2002; 99:10635–10640.[Abstract/Free Full Text]