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Blood, Vol. 95 No. 5 (March 1), 2000: pp. 1709-1713

HEMOSTASIS, THROMBOSIS, AND VASCULAR BIOLOGY

Hypofibrinogenemia in an individual with 2 coding (gamma 82 Aright-arrow G and Bbeta 235 Pright-arrow L) and 2 noncoding mutations

Stephen O. Brennan, Andrew P. Fellowes, James M. Faed, and Peter M. George

From the Molecular Pathology Laboratory, Canterbury Health Laboratories, Christchurch Hospital, Christchurch, New Zealand, and Blood Transfusion Service, Dunedin Hospital, Dunedin, New Zealand.


    Abstract
Top
Abstract
Introduction
Materials and methods
Results
Discussion
References

We investigated the molecular basis of hypofibrinogenemia in a man with a normal thrombin clotting time. Protein analysis indicated equal plasma expression of 2 different Bbeta alleles, and DNA sequencing confirmed heterozygosity for a new Bbeta 235 Pright-arrowL mutation. Protein analysis also revealed a novel gamma D chain, present at a ratio of 1:2 relative to the gamma A chain. Mass spectrometry indicated a 14 d decrease in the gamma D-chain mass, and DNA sequencing showed this was caused by a novel gamma 82 Aright-arrowG substitution. DNA sequencing established heterozygosity for 2 further mutations: Tright-arrowC in intron 4 of the Aalpha gene and Aright-arrowC in the 3' noncoding region of the Bbeta gene. Studies on the man's daughter, together with plasma expression levels, discounted both the Aalpha and Bbeta mutations as the cause of the low fibrinogen, suggesting that the gamma 82 mutation caused the hypofibrinogenemia. This was supported by analysis of 31 normal controls in whom the Bbeta mutations were found at polymorphic levels, with an allelic frequency of 5% for the Bbeta 235 mutation and 42% for the Bbeta 3' untranslated mutation. The gamma 82 mutation was, however, unique to the propositus. Residue gamma 82 is located in the triple helix that separates the E and D domains, and aberrant packing of the helices may explain the decreased fibrinogen concentration. (Blood. 2000;95:1709-1713)

© 2000 by The American Society of Hematology.


    Introduction
Top
Abstract
Introduction
Materials and methods
Results
Discussion
References

Fibrinogen is the focal point of the coagulation cascade, which results in the conversion of fibrinogen to fibrin monomer and the eventual covalent cross-linking of the fibrin polymer. Fibrinogen, a 340-kd glycoprotein, is synthesized in the liver as a dimer with each half composed of 3 different polypeptide chains (Aalpha , Bbeta , and gamma ). These chains, and each half molecule, are linked by a network of 29 disulfide bonds to form the circulating protein.1 The central E domain of the trinodal structure is connected to 2 globular D domains by a triple helix of Aalpha , Bbeta , and gamma  chains. These peripheral D domains are composed of the independently folding homologous C-terminal regions of the Bbeta and gamma  chains,2 while the C-terminal half of the Aalpha chain extends freely in solution, but appears to fold back and form a globular structure that interacts with the central E domain.3

Some 40 different mutations have been identified as causing dysfibrinogenemia,4 and a few of these mutations also result in decreased plasma expression. Notable among these are fibrinogens Marburg and Otago, where in homozygotes a 25% and 56% C-terminal truncation of the Aalpha chain results in a polymerization defect and hypofibrinogenemia, with circulatory levels of 0.6 and 0.1 mg/mL respectively.5,6 Surprisingly, a heterozygote for the severe Otago truncation showed no plasma expression of the variant and had a normal fibrinogen concentration (1.6 mg/mL). Similarly, while Marburg heterozygotes expressed the variant chain at only 10%, they too had normal fibrinogen concentrations (average, 1.9 mg/mL). This suggests that the synthesis of Aalpha chains is not limiting, and indeed other studies have shown that the expression of fibrinogen is regulated largely by sequences within the Bbeta gene.7 Here we report the investigation of an individual with moderate hypofibrinogenemia and identify a novel gamma -chain mutation as the apparent cause. This is the first case of hypofibrinogenemia (as distinct from dysfibrinogenemia) for which the molecular basis has been identified, and it is the first report of a compound heterozygote for 2 fibrinogen mutations.


    Materials and methods
Top
Abstract
Introduction
Materials and methods
Results
Discussion
References

Citrate-anticoagulated blood was collected, and standard coagulation assays were used to measure thrombin and reptilase times. Functional fibrinogen levels were determined by means of the Clauss method, and gravimetric levels by quantification of fibrinopeptide release from whole plasma.8

Fibrinogen was purified by precipitation with 20% saturated ammonium sulfate, and the pellet was washed 3 times with 25% saturated ammonium sulfate.8 Sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) (7.5% reducing gels) was carried out as described by Laemmli,9 and relative band intensities were determined by densitometric scanning of Coomassie stained gels. For chain separation, fibrinogen (5 mg/mL) was dissociated by reduction in 8 mol/L urea, 0.1 mol/L Tris/HCl (pH 8.0), and 15 mmol/L dithiothreitol for 4 hours at 37°C, and individual chains were isolated by high-performance liquid chromatography (HPLC) on a Phenomenex (Torrence, CA) C-4 column (25 × 0.45 cm). After injections of 1 mg of protein, the column was developed with a 0.05% trifluoroacetic acid/acetonitrile gradient at a flow rate of 0.75 mL/min.10

HPLC peak crests spanning a volume of 200 µL were collected and analyzed directly by electrospray ionisation (ESI) mass spectrometry (MS) on a VG Platform quadrupole analyzer.11 We injected 10 to 30 µL of each peak into the ion source at 5 µL/min. The probe was charged at + 3500 V and the source maintained at 60°C. The mass range 700 of 1600 m/z was scanned every 3 seconds, and a cone voltage ramp of 30 to 60 V was applied over this range. Up to 100 scans were averaged in acquiring the raw data. Calibration was made over this same m/z range by use of the charge series generated by human alpha  globin, and data were acquired and processed by means of MassLynx software (Micromass, Manchester, UK) and transformed onto a true molecular mass scale with the use of maximum entropy (MaxEnt) software (Micromass) as described previously.10

Tryptic digests were prepared from approximately 0.25 mg of HPLC-isolated Bbeta and gamma  chains. The individual chains were dried under N2 and redissolved in 50 µL of 25 mmol/L NH4HCO3 in 10% acetonitrile. Trypsin (3 µg) was added and the reaction incubated for 16 hours at 37°C. After being dried under vacuum with P2O5, digests were redissolved in 200 µL of 0.1% HCOOH, 50% acetonitrile, and 20 µL was analyzed by ESI MS. The m/z range of 300 to 1600 was scanned every 3.5 seconds.

Genomic DNA was isolated from buffy coat by a standard procedure.12 The entire coding region and flanking intronic sequences of all 3 fibrinogen genes were amplified by polymerase chain reaction (PCR),13 and PCR products were purified with the use of HiPure PCR purification cartridges (Boehringer, Mannheim, Germany). Cycle sequencing was performed with either an amplification primer or an internal sequencing primer with the use of 33P-radiolabeled dideoxy-terminators and Thermosequenase (Amersham, Amersham, UK) according to the manufacturer's instructions.

The frequency of the Bbeta 235 Pright-arrowL and gamma 82 Aright-arrowG mutations (single-letter amino acid code) were determined by screening 31 unrelated normal individuals using an allele-specific PCR assay.14 The allele-specific primer gamma 82G (5'-GATCCTATATTACAGATATGATAGACGCTCG-3') and the primer Fn959gamma (5'-TATAAATGGGGAAAACACAT-3') were used to amplify a 202-bp product from the gamma 82 G allele while, in a separate reaction, the allele-specific primer beta 235L (5'-TCTCATTCAACCTGACAGTTCTGTCAAAGT-3') and the primer Fn6050beta (5'-GTGCTGGAATTACAGGTATG-3') were used to amplify a 174-bp product from the beta 235 L allele. These primers were used at a final concentration of 0.2 µmol/L while beta -globin primers at 0.025 µmol/L (beta  globin 5': 5'-GCCGTGCCAGAGAGCCAA-3'; beta  globlin 3': 5'-TTAGGGTTGCCCATAACAGC-3') provided a 514-bp internal control. Each 25 µL PCR reaction also contained 200 µmol/L deoxynucleotide triphosphates, 50 mmol/L KCl, 10 mmol/L Tris/HCl (pH 8.3), 1.5 mmol/L MgCl2, 0.1% (wt/vol) gelatin, and 10 to 20 ng template DNA. Reactions were hot-started by the addition of 1 U of Taq DNA polymerase after the first denaturation. PCR was performed for 35 cycles of denaturation at 94°C for 30 seconds, annealing at 58°C for 30 seconds, and extension at 72°C for 1 minute, and products were electrophoresed in 2% (wt/vol) agarose and visualized by ethidium bromide staining.

The frequency of the Bbeta 3'-untranslated sequence variation was determined by HinfI restriction digestion of a 262-bp PCR product amplified from the same 31 unrelated controls. Each 50 µL reaction contained 0.5 µmol/L Fn8349beta (5'-CAGTTCTAGTTGATTGCGAG-3'), and 0.5 µmol/L Fn8610beta (5'-GCTTCTCCTTCCTTACAAGT-3'), and amplification was as above. Products were analyzed on 3% (wt/vol) Nusieve/agarose (3:1) (FMC, Rockland, MN) after the addition of 10 U HinfI and a further 3 hours' incubation at 37°C.


    Results
Top
Abstract
Introduction
Materials and methods
Results
Discussion
References

Case report

Hypofibrinogenemia was first diagnosed at age 79 years when the patient developed a large wound hematoma following inguinal hernia repair. During the procedure, some bleeding was noted; however, this appeared to be easily controlled. Reexploration of the wound hematoma disclosed surgical bleeding points in the spermatic cord and external iliac vein. The patient admitted to only a mild tendency to increased bleeding from cuts in the past. A retropubic prostatectomy was performed at age 59 years and required a urethral catheter for 2 weeks.

Surgical resection of a pharyngoesophageal pouch was carried out after infusing a single preoperative dose of cryoprecipitate, which increased fibrinogen levels from 1.0 mg/mL to 3.7 mg/mL (kinetic assays). Hemostasis was clinically normal during the procedure and convalescence. At age 88 years, he developed transient ischemic attacks, angina, and mild left ventricular failure. Treatment included aspirin and persantin, but aspirin was withdrawn after development of rectal bleeding. At this time, he also had a mild thrombocytopenia (102 × 109/L), which may be an early indication of myelodysplasia.

There is no history of hepatitis, and coagulation tests have consistently shown low functional fibrinogen of 0.7 to 1.1 mg/mL (normal range 1.5 to 4.0) and gravimetric levels of 0.8 mg/mL together with normal thrombin (18 seconds) and reptilase times (18 seconds). Fibrin degradation products were negative; the activated partial thromboplastin time has given high normal values, 30 to 34 seconds (22 to 33 seconds), prothrombin time 12.6 (range, 10.0 to 15.0), von Willebrand factor antigen 85% (range, 50% to 150%), ristocetin cofactor 90% (range, 50% to 150%), factor VIII 55% (range, 50% to 150%), factor IX 47% (range, 50% to 150%), factor XI 91% (range, 50% to 150%), and factor XII 57% (range, 50% to 150%).

It is concluded that the patient has a mild tendency toward increased bleeding that is clinically apparent only in the presence of moderate or severe tissue injury, but that may be enhanced by antiplatelet agents, such as aspirin. In the absence of clinical laboratory assessment for qualitative platelet defects, factor XIII, and fibrinolytic parameters, the origin of this patient's mild bleeding tendency remains an open question. His daughter, the only other family member available for study, appeared normal with a functional fibrinogen concentration of 3.5 mg/mL and a thrombin clotting time of 18 seconds.

Protein and DNA analysis

Analysis of purified fibrinogen from the propositus by SDS-PAGE showed a doublet Bbeta band together with a normal pattern of Aalpha and gamma  chains (Figure 1A). The doublet Bbeta band was consistently present in several different plasma samples, and the 2 components were in a 1:1 ratio in the different samples. Western blots with an anti-Aalpha chain antiserum showed reactivity only against the Aalpha doublet and not against the Bbeta doublet. This suggested a Bbeta mutation, but the equal expression of the 2 alleles negated the possibility that the mutation might be the cause of the hypofibrinogenemia. Further analysis of the reduced fibrinogen chains by reverse-phase HPLC also indicated an abnormal pattern, but here (Figure 1B) the Aalpha and Bbeta peaks appeared normal, and a more hydrophilic gamma D chain was present in addition to the normal gamma A chain. Again, this unusual pattern was consistently reproduced with fibrinogen purified from several different plasma samples, and the ratio of gamma D to gamma A was found to be 1:2. SDS-PAGE of the purified HPLC peaks showed that the Bbeta peak consisted of 2 components of similar intensity and that the separated gamma D and gamma A peaks comigrated on electrophoresis (not shown).


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Fig 1. Analysis of purified fibrinogen. Fibrinogen from Dunedin plasma is shown in comparison with normal fibrinogen. (A) Analysis by SDS-PAGE (7.5% reducing gel). Note additional Bbeta D band. (B) Analysis by reverse phase HPLC. Note new gamma D peak.

Individual HPLC peaks were also examined after direct injection into an ESI mass spectrometer. This indicated molecular weights of 66 156 d for the Aalpha chains and 54 200 d for the major (monosialo) isoform of the Bbeta -chain mixture. However, these values were not significantly different from the control values (66 150 and 54 193 d, respectively). The monosialo isoform of the gamma A and gamma D chains, purified from the propositus, had masses of 48 369 and 48 356 d, respectively. The difference between these values seemed significant, and a mean decrease of 14 d (SD=3 d) was observed for the gamma D chain in 5 separate experiments.

Tryptic peptide mapping was used to locate the site of this putative genetic lesion. ESI MS maps of purified gamma A and gamma D chains showed that both the M+2H and M+3H ions of peptide T8 (residues gamma 63-68) were missing from the gamma D digests. These ions have theoretical m/z values of 1261.4 and 841.2, respectively, and they can be clearly seen in the gamma A- and control gamma -chain digests (Figure 2A). In the gamma D mass spectrum, they are replaced by signals at 1254.0 and 836.2 m/z, indicating a mass of 2506 d for peptide T8D, compared with 2520 d for T8A. PCR amplification and direct sequencing of DNA encoding the T8 peptide (exons 3 and 4) indicated heterozygosity for a gamma 82 A (GCT)right-arrowG (GGT) substitution (Figure 3D). This is the first report of this substitution, which we have named the fibrinogen Dunedin mutation.


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Fig 2. ESI MS tryptic peptide maps. (A) gamma  chains showing (from top) purified gamma A from the propositus, purified gamma D chains from the propositus, and gamma A chains from a control. Note the disappearance of 1261 and 841 m/z ions and their replacement by ions at 1254 and 836 m/z. (B) Mixture of Bbeta D/Bbeta A from propositus and Bbeta A chains from a control. Note the 50% decrease of the 1129 m/z ion and the appearance of a new ion at 985 m/z.



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Fig 3. Unique fibrinogen gene sequence variations detected in subject from Dunedin. Abnormal bases are denoted by an asterisk. Lanes labeled N correspond to normal control sequence, while those labeled D are from propositus. Nucleotide positions are based on the numbering in the respective Genbank entries M64 982 (Aalpha ), M64 983 (Bbeta ) and M10 014 (gamma ). (A) Sequence surrounding nucleotide 3237 in intron 4 of the Aalpha -chain gene obtained with the forward primer Fn3003gamma (5'-TTACAGACAAATCACTCAGCAGCT-3'). Dunedin subject is heterozygous for a Tright-arrowC transition. (B) Sequence surrounding nucleotide 5906 in exon 5 of the Bbeta -chain gene obtained with the reverse primer Fn6050beta (5'-GTATGGACATTAAGGTCGTG-3'). Dunedin subject is heterozygous for a Gright-arrowA (coding strand Cright-arrowT) transition, which predicts the substitution Bbeta 235 Pright-arrowL. (C) Sequence surrounding nucleotide 8525 in the 3' untranslated region of the Bbeta -chain gene obtained with the reverse primer Fn8610beta (5'-TGAACATTCCTTCCTCTTCG-3'). Dunedin subject is heterozygous for an Aright-arrowC transversion. (D) Sequence surrounding nucleotide 2525 in exon 4 of the gamma -chain gene obtained with forward primer Fn2479gamma (5'-GGATTTTTATGTCTCTGATC-3'). Dunedin subject is heterozygous for a Cright-arrowG transversion, which predicts the substitution gamma 82 Aright-arrowG.

When mass spectra of tryptic digests of the Bbeta -chain mixture were compared with control digests, 2 features were of particular relevance. The signal at 1129.3 m/z was approximately half the intensity seen in the controls, and there was a new ion present at 985.0 m/z (Figure 2B). Since the 1129.3 m/z signal corresponds to the predicted M+2H ion (1129.7) of peptide T27, this suggested that the propositus was heterozygous for a mutation occurring between residues Bbeta 218 and Bbeta 237. This is also consistent with the initial SDS gels, which showed 2 different Bbeta components of similar intensity.

Direct sequencing of amplified DNA confirmed heterozygosity for a novel Bbeta variant when a Cright-arrowT mutation was identified in exon 5 (Figure 3B). As expected, this Bbeta 235 Pright-arrowL substitution is located in tryptic peptide T27 (GGETSEMYLIQPDSSVKPYR237). Trypsin is unable to cleave the -K-P- bond in this peptide; however, the Pright-arrowL substitution renders the K susceptible to cleavage. Predictably, this would result in the appearance of a new peptide (GGETSEMYLIQPDSSVK), and since this sequence is preceded by an RK sequence, another new peptide (KGGETSEMYLIQPDSSVK) would also be expected. This latter peptide would have an expected M+2H ion at 985.1 m/z, and this was indeed seen in the patient's spectrum at 985.0 m/z (Figure 2B).

While it was possible that the gamma 82 Aright-arrowG mutation (rather than the coexpressed Bbeta 235 Pright-arrowL mutation) might explain the hypofibrinogenemia, it was also possible that an additional mutation might contribute to the low circulatory fibrinogen. With this in mind, we sequenced the entire coding region and the intron/exon boundaries of the Aalpha , Bbeta , and gamma  genes. We detected 2 additional new heterozygous mutations during this analysis: 1 in intron 4 of the Aalpha gene (Figure 3A) and the other in the 3' untranslated region of the Bbeta gene (Figure 3C).

Since the Aalpha -, Bbeta -, and gamma -chain genes are present as a cluster on chromosome 4, it was important to establish which of the 4 mutations cosegregated and which was associated with the hypofibrinogenemia. Unfortunately, only 1 daughter was available for study. Examination of her DNA and purified fibrinogen showed that she had inherited the Aalpha intron 4 and the Bbeta untranslated mutations, but that she had neither the Bbeta 235 Pright-arrowL nor the gamma 82 Aright-arrowG amino acid substitutions. Thus, the gamma 82 Aright-arrowG and Bbeta 235 Pright-arrowL mutations must be on the same chromosome in the father, and since the daughter has a normal fibrinogen concentration (3.5 mg/mL), 1 of these substitutions must be responsible for the hypofibrinogenemia. However, the equivalent expression of the 2 Bbeta variants in the father suggests that the gamma  defect is the actual cause of his hypofibrinogenemia.

The finding of multiple mutations implied that some might be at polymorphic frequency in the population, so we examined DNA from 31 normal individuals. PCR amplification followed by HinfI digestion established an allelic frequency of 42% for the Bbeta 3' untranslated Aright-arrowC mutation, while allele-specific amplification followed by agarose gel electrophoresis indicated a frequency of 5% for the Bbeta 235 Pright-arrowL mutation. SDS-PAGE of fibrinogen from the latter individuals confirmed the presence of a Bbeta doublet band. The mean plasma fibrinogen for individuals heterozygous for these 2 mutations were 3.0 and 3.1 mg/mL respectively. The gamma 82 Aright-arrowG substitution was, however, unique to the propositus.

We also examined the father and daughter for 4 other fibrinogen gene-cluster polymorphisms; both were homozygous for the common Aalpha TaqI, Bbeta BclI, Bbeta MnlI, and Bbeta HindIII alleles (the latter being associated with higher fibrinogen levels).


    Discussion
Top
Abstract
Introduction
Materials and methods
Results
Discussion
References

Plasma fibrinogen levels are genetically determined15 and several studies have shown an association between polymorphisms in the fibrinogen gene cluster and elevated fibrinogen. In turn, these high levels have been correlated with an increased risk of arterial thrombosis and coronary artery disease.16-19 Hypofibrinogenemia may occur as an acquired condition associated with acute liver disease, but few genetic determinants of hypofibrinogenemia have been characterized. Very low levels can result in prolonged bleeding and miscarriage,6 and surprisingly, some hypofibrinogenemic individuals may also suffer from thrombotic tendencies.20

Here we have identified 4 novel mutations (1 Aalpha , 2 Bbeta , and 1 gamma ) in an individual with hypofibrinogenemia. This raised the question: which mutation was actually responsible for the decreased plasma expression of the fibrinogen? This was resolved by 3 different approaches: family studies, measurement of the relative plasma levels of the different allelic products, and gene frequency analysis in normal subjects.

The Aalpha intron 4 mutation was excluded on the basis that it was also identified in the patient's normal daughter. This woman also had the Bbeta 3' untranslated Aright-arrowC mutation, but not the Bbeta 235 Pright-arrowL substitution. However, both of the beta  mutations were excluded as possible causes of the hypofibrinogenemia because unrelated individuals with these mutations did not have hypofibrinogenemia and because there was equivalent expression of the 2 Bbeta alleles in the propositus. This coexpression was evidenced by, the 2 Bbeta bands on SDS-PAGE, and the 50% reduction in intensity of the Bbeta T8 peptide on ESI MS peptide mapping.

The evidence that the gamma 82 Aright-arrowG mutation was the actual cause of the hypofibrinogenemia comes from (1) the decreased plasma level of this variant chain, (2) its absence in the unaffected daughter, and (3) its absence in the normal group that was examined.

Chain separation by HPLC established that the gamma D/gamma A chain ratio was 1:2 in plasma fibrinogen. It may seem implausible that this small decrease in the relative plasma expression could satisfactorily explain the hypofibrinogenemia. However, after DNA sequencing of all 3 fibrinogen genes, and elimination of 3 other candidate mutations, we are left with the conclusion that the gamma 82 Aright-arrowG substitution is most probably responsible for the low fibrinogen concentration.

At least 2 mechanisms may be postulated. If the 2 gamma  genes are expressed at equal levels and incorporated randomly into the 340-kd dimer, then 75% of the molecules (25% Aalpha 2 Bbeta 2 gamma D2 and 50% Aalpha 2 Bbeta 2 gamma Dgamma A) will contain a gamma D chain. In this case. any destabilization resulting from the gamma D aberration would affect the stability of molecules containing gamma A chains as well, thereby maintaining a relatively high gamma D/gamma A ratio, but having a major negative impact on fibrinogen concentration. Alternatively, it is possible that the GCTright-arrowGGT mutation at codon 82 might activate a cryptic 5' splice site in exon 4 (Figure 4). This putative new site appears as attractive as the normal 5' site, and if both are used, normal splicing would produce the mutant gamma D chain, while aberrant splicing would produce an abnormal chain truncated after residue 97. This chain would be nonviable, and the product of the gamma D gene would be decreased by a value reflected in the observed 1:2 gamma D/gamma A ratio. However, aberrant splicing appears insufficient to account for the hypofibrinogenemia, since the supply of gamma  chain messenger RNA is not limiting.7 Also heterozygotes for variants with no, or very low, plasma expression have normal fibrinogen levels.6 Although we favor the former protein instability mechanism for explaining the hypofibrinogenemia, mutations within the promoter have not been excluded.


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Fig 4. Possible intron 4 splicing events as a result of the gamma 82 Aright-arrowG substitution. Conserved bases are underlined, and the invariant GT is in bold. The consensus 5' splice site21 is shown above the line with the normal 5' splice site for intron 4 shown below. gamma 82 Aright-arrowG introduces a potential 5' splice site by creating a new GT with 4 of the surrounding 7 bases adhering to the consensus sequence. Translation of this message would result in a truncated polypeptide ending in the novel sequence 82DICRKYIIQIIKRLLT.97

Neither the gamma 82 nor the Bbeta 235 mutation appears to have any effect on polymerization as judged by thrombin time assay. This is not surprising considering their respective locations, in the center of the triple helix and in the beta -chain D domain close to its junction with the triple helix. The triple helix contains no known functional sites and is essentially a spacer between the functional E and D domains. Although the gamma -chain D domain contains a number of critical polymerization sites, the crystal structure shows that Bbeta 235 is well away from homologous sites in the Bbeta chain. Bbeta 235 P occurs immediately before the third beta  sheet of the D domain. This position is quite tolerant of different side chains, being occupied by Q in the gamma  chain and I in the alternate alpha E transcript.22 Predictably, therefore, the P-to-L mutation would be quite benign, and this prediction was confirmed by finding it at a polymorphic frequency in a normal population.

Residue gamma 82 is located in the protease-sensitive region in the middle of the triple helix that connects the E domain to the outer D domains and is not included in the available crystal structures. Sequence in this region is not highly conserved, but large hydrophobic residues of Y and V occupy the corresponding position in the Aalpha and Bbeta strands. Glycine is underrepresented in this region, with only 3 occurrences in the 337 residues that make up the triple helix. The absence of a side chain on the new G could destabilize the helix packing and impair molecular assembly or render the mature molecule more susceptible to proteolytic degradation.

Our finding that gamma 82 is an important determinant of plasma fibrinogen levels highlights the role of mutation analysis in defining novel functional sites. This case suggests that the triple helix structure can affect the assembly, secretion, or half-life of fibrinogen. Future studies should examine these concepts and the detailed structure of this domain. The finding of 3 new polymorphisms suggests that the fibrinogen genes are more variable than presently recognized and that care needs to be taken when assigning a phenotype to a particular DNA mutation.


    Acknowledgment

We thank Silvia Parkin for performing the coagulation studies.


    Footnotes

Submitted June 1, 1999; accepted October 28, 1999.

Supported by the Canterbury Medical Research Foundation, Lottery Health, and the Health Research Council of New Zealand.

Reprints: S. O. Brennan, Molecular Pathology Laboratory, Canterbury Health Laboratories, Christchurch Hospital, Christchurch, New Zealand; e-mail: steve.brennan{at}chmeds.ac.nz.

The publication costs of this article were defrayed in part by page charge payment. Therefore, and solely to indicate this fact, this article is hereby marked "advertisement" in accordance with 18 U.S.C. section 1734.


    References
Top
Abstract
Introduction
Materials and methods
Results
Discussion
References

1. Henschen AH, McDonagh J. Fibrinogen, fibrin and factor XIII. In: Zwaal RFA,Hemker HC, eds. Blood Coagulation. Vol 13. Amsterdam, The Netherlands: Elsevier Science Publishers B.V. (Biomedical Division).; 1986:171.

2. Doolittle RF. The molecular biology of fibrin. In: Stamatoyannopoulos G,Nienhuis AW,Majerus PW,Varmus H, eds. The Molecular Basis of Blood Diseases. Philadelphia, PA: W.B. Saunders Company.; 1994:701.

3. Veklich YI, Gorkun OV, Medved LV, Nieuwenhuizen W, Weisel JW. Carboxyl-terminal portions of the alpha  chains of fibrinogen and fibrin: localization by electron microscopy and the effects of isolated alpha C fragments on polymerization. J Biol Chem. 1993;268:13,577[Abstract/Free Full Text].

4. Everse SJ, Spraggon G, Doolittle RF. A three-dimensional consideration of variant human fibrinogens. Thromb Haemost. 1998;80:1[Medline] [Order article via Infotrieve].

5. Koopman J, Haverkate F, Grimbergen J, Egbring R, Lord ST. Fibrinogen Marburg: a homozygous case of dysfibrinogenemia, lacking amino acids Aalpha 461-610 (Lys461 AAAright-arrowStop TAA). Blood. 1992;80:1972[Abstract/Free Full Text].

6. Ridgway HJ, Brennan SO, Faed JM, George PM. Fibrinogen Otago: a major alpha  chain truncation associated with severe hypofibrinogenaemia and recurrent miscarriage. Br J Haematol. 1997;98:632[Medline] [Order article via Infotrieve].

7. Zhang JL, Desai M, Ozanne SE, Doherty C, Hales CN, Byrne CD. Two variants of quantitative reverse transcriptase PCR used to show differential expression of alpha -, beta - and gamma -fibrinogen genes in rat liver lobes. Biochem J. 1997;321:769.

8. Brennan SO, Hammonds B, George PM. Aberrant hepatic processing causes removal of activation peptide and primary polymerisation site from fibrinogen Canterbury (Aalpha 20 Valright-arrowAsp). J Clin Invest. 1995;96:2854.

9. Laemmli UK. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature. 1970;227:680[Medline] [Order article via Infotrieve].

10. Brennan SO. Electrospray ionisation analysis of human fibrinogen. Thromb Haemost. 1997;78:1055[Medline] [Order article via Infotrieve].

11. Brennan SO, Loreth RM, George PM. Oligosaccharide configuration of fibrinogen Kaiserslautern: electrospray ionisation analysis of intact gamma  chains. Thromb Haemost. 1998;80:263[Medline] [Order article via Infotrieve].

12. Ciulla TA, Sklar RM, Hauser SL. A simple method for DNA purification from peripheral blood. Anal Biochem. 1988;174:485[Medline] [Order article via Infotrieve].

13. Saiki RK, Gelfand DH, Stoffel S, et al. Primer-directed enzymatic amplification of DNA with a thermostable DNA polymerase. Science. 1988;239:487[Abstract/Free Full Text].

14. Ferrie RM, Schwarz MJ, Robertson NH, et al. Development, multiplexing, and application of ARMS tests for common mutations in the CFTR gene. Am J Hum Genet. 1992;51:251[Medline] [Order article via Infotrieve].

15. Hamsten A, Iselius L, de Faire U, Blombäck M. Genetic and cultural inheritance of plasma fibrinogen concentration. Lancet. 1987;2:988[Medline] [Order article via Infotrieve].

16. Behague I, Poirier O, Nicaud V, et al. beta fibrinogen gene polymorphisms are associated with plasma fibrinogen and coronary artery disease in patients with myocardial infarction: the ECTIM Study. Etude Cas-Temoins sur l'Infarctus du Myocarde. Circulation. 1996;93:440[Abstract/Free Full Text].

17. Zito F, Di Castelnuovo A, Amore C, D'Orazio A, Donati MB, Iacoviello L. Bcl I polymorphism in the fibrinogen beta -chain gene is associated with the risk of familial myocardial infarction by increasing plasma fibrinogen levels: a case-control study in a sample of GISSI-2 patients. Arterioscler Thromb Vasc Biol. 1997;17:3489[Abstract/Free Full Text].

18. Schmidt H, Schmidt R, Niederkorn K, et al. beta -fibrinogen gene polymorphism (C148right-arrowT) is associated with carotid atherosclerosis: results of the Austrian stroke prevention study. Arterioscler Thromb Vasc Biol. 1998;18:487[Abstract/Free Full Text].

19. de Maat MP, Kastelein JJ, Jukema JW, et al. -455G/A polymorphism of the beta -fibrinogen gene is associated with the progression of coronary atherosclerosis in symptomatic men: proposed role for an acute-phase reaction pattern of fibrinogen. REGRESS group. Arterioscler Thromb Vasc Biol. 1998;18:265[Abstract/Free Full Text].

20. Chafa O, Chellali T, Sternberg C, Reghis A, Hamladji RM, Fischer AM. Severe hypofibrinogenemia associated with bilateral ischemic necrosis of toes and fingers. Blood Coagul Fibrinolysis. 1995;6:549[Medline] [Order article via Infotrieve].

21. Mount SM. A catalogue of splice junction sequences. Nucleic Acids Res. 1982;10:459[Abstract/Free Full Text].

22. Spraggon G, Applegate D, Everse SJ, et al. Crystal structure of a recombinant alpha EC domain from human fibrinogen-420. Proc Natl Acad Sci U S A. 1998;95:9099[Abstract/Free Full Text].


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