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HEMOSTASIS, THROMBOSIS, AND VASCULAR BIOLOGY
From the Departments of Pediatrics and Pathology,
University of Pennsylvania and the Children's Hospital of
Philadelphia, Philadelphia, PA.
Serine protease factor Xa plays a critical role in the coagulation
cascade. Zymogen factor X is synthesized and modified in the liver. To
understand the mechanisms governing the liver-specific expression of
factor X, the proximal promoter of human factor X was previously
characterized. Two crucial cis elements at Blood coagulation factor X, in its activated form,
plays a central role in the coagulation cascade. Circulating zymogen
factor X is activated by the factor VIIa-tissue factor complex
(extrinsic tenase) or by factor Ixa-VIIIa (intrinsic tenase).
Membrane-bound factor Xa, together with its cofactor factor Va,
converts prothrombin to thrombin, which in turn cleaves fibrinogen and
results in the formation of the fibrin clot.1 In addition
to its role in coagulation, factor Xa has recently been found to elicit
intracellular signaling in leukocytes, endothelial cells, and vascular
smooth muscle cells through binding to the effector cell protease
receptor-1 and other yet to be identified receptors.2-5
Activation of cells by factor Xa leads to the release of growth factors
and cytokines important in the acute inflammatory response. Thus,
factor Xa provides a crucial interface between the coagulation and
inflammation processes.
Factor X, like other vitamin K-dependent coagulation factors, is
primarily synthesized in the liver, where it undergoes extensive post-translational modifications including the To understand the mechanisms governing the expression of factor X, we
have carried out functional characterization of the 5' flanking region
of the human factor X gene.7,8 Transcription of
factor X initiates at multiple sites, a feature characteristic of
TATA-less genes. The proximal 209 base pair (bp) 5' to the translation
start site are sufficient for maximal promoter activity. Using DNase I
footprinting analysis with nuclear extracts from HepG2 cells, we
identified 4 transcription factor-binding sites in this promoter
fragment. Site 1( In this report, we further characterize the factor X promoter and
identify GATA-4, Sp1/Sp3 as important positive regulators. We found
that a gut-specific transcription factor GATA-4 binds a canonical GATA
site at the 3' end of site 2. Expression of GATA-4 significantly
increases factor X promoter activity. We also identified the proteins
binding at site 3 ( Plasmids
Reporter gene assays
Gel mobility shift assays Gel mobility shift assays for protein binding at site 3 and site 4 were carried out as described previously.7 Nuclear extracts used in the gel shift assays were prepared as described previously.7 For binding at the GATA site, salmon sperm DNA was omitted, and the concentration of MgCl2 was reduced to 1 mM. For supershift assays, the following antibodies were used: GATA-2 (C-20), GATA-4 (C-20), Sp1 (PEP-2), and Sp3 (D-20) (all from Santa Cruz Biotechnology, Santa Cruz, CA).Modified aPTT assays using murine plasma Modified aPTT tests were performed as described in the presence of human factor X-deficient plasma (Organon Teknika, Durham, NC).11 Plasma samples from heterozygous GATA-4 mice and wild-type littermates were gifts from Dr Leiden.
DNase I footprint site 2 of the human factor X promoter contains a canonical GATA site We previously carried out DNase I footprinting assays to determine transcription factor binding sites at the proximal promoter of factor X. Of the 4 protein-protected sites, site 2 (from 128 to 93)
contains a CCAAT box and a canonical GATA binding site, TGATAA. We
identified NF-Y as the protein that binds the CCAAT box. We next sought
to determine whether the GATA site binds one of the GATA transcription
factors. An oligonucleotide spanning 109 to 80 of the factor X
promoter was radiolabeled and used in gel mobility shift assays. As
shown in Figure 1A, the GATA site from
the factor X promoter binds a specific protein in nuclear extracts from
human liver, rat liver, rat kidney, and rat spleen. Interestingly,
there is little binding activity in HepG2 nuclear extracts. This
preparation of HepG2 nuclear extracts binds a site 3 oligonucleotide
equally well when compared to the human liver extracts (data not
shown), indicating that the low binding activity in HepG2 nuclear
extracts is not an artifact caused by poor preparation. A single
nucleotide substitution changing the GATA sequence to CATA completely abolishes binding of the oligonucleotide to
the factor in liver nuclear extracts (Figure 1A, lane 7). To further demonstrate the specificity of the binding, wild-type and mutant oligonucleotides were used as cold competitors in gel mobility shift
assays (Figure 1B). The addition of unlabeled wild-type oligonucleotide, even at a low concentration (20×), effectively competes away the specific protein-DNA complex (lanes 1 to 4), whereas
the addition of unlabeled mutant oligonucleotide (up to 200×) has no
effect on the formation of the complex (lanes 5 to 7).
GATA-4 from liver extracts binds the GATA site Although several GATA factors GATA-2, -4, -5, and -6 are
expressed in the liver,12,13 only GATA-4 has been
demonstrated to bind the GATA site in the enhancer of a liver-specific
gene, the mouse albumin gene.14 Therefore, we sought to
determine whether GATA-4 is the liver nuclear protein that binds the
GATA site in the factor X promoter. As shown in Figure
2, the addition of an antibody against
GATA-4 completely supershifts the DNA-protein complex to a slower
mobility (compare lane 2 to lane 1). Because this antibody does not
cross-react with other members of the GATA family, this result
indicates that GATA-4 is the sole GATA factor in liver that binds the
factor X GATA site. In contrast, an antibody against GATA-2 has no
effect on the formation of the DNA-protein complex (lane 4). To
confirm the finding in Figure 1A, where HepG2 nuclear extracts are
shown to contain little GATA binding activity, we performed Western
blot analysis of nuclear extracts from liver and HepG2 with
anti-GATA-4. Consistent with the gel shift results, HepG2 cells do not
express significant levels of GATA-4 when compared to the liver
(Figure 2B).
GATA-4 transactivates the factor X promoter To evaluate the functional significance of the GATA site in the factor X promoter, we introduced a mutant promoter construct defective in GATA-4 binding (mut GATA, where GATA is changed to CATA) into HepG2 cells and performed reporter gene assays. Disruption of the GATA site results in a moderate reduction of the promoter activity (71.6% of wild type; Figure 3A). This is not surprising because HepG2 cells contain little, if any, GATA binding activity (Figure 1A). Therefore, we co-transfected a GATA-4 expression vector with the factor X promoter reporter construct into HepG2 cells (Figure 3B). We used a truncated factor X promoter construct (FX-108GH); the full-length promoter construct has such a high activity that the addition of GATA-4 cannot further increase its level. GATA-4 significantly stimulates the factor X promoter (28-fold). Mutation at the GATA site significantly diminishes the response to GATA-4 (6.4-fold). The residual response is attributed to a possible cryptic GATA site in the growth hormone structural gene because a promoter-less reporter, p0GH, is also stimulated by GATA-4. We also performed transactivation experiments in a nonhepatic environment, NIH 3T3 cells (Figure 3C). GATA-4 activates the factor X promoter to a lesser extent (10-fold) in NIH 3T3 cells. This result suggests that GATA-4 may cooperate with factors present only in the liver.
Heterozygous GATA-4 knockout mice express normal levels of factor X To address the requirement of GATA-4 for the expression of factor X, we assessed plasma factor X levels in a sample from a heterozygous GATA-4 knockout mouse. Murine plasma was added to human factor X-deficient plasma, and the aPTT was determined and compared to a standard curve generated using normal mouse plasma. These experiments showed no difference between the heterozygote and a wild-type littermate (heterozygote, 39.9 seconds; wild type, 39.2 seconds; 1 to 40 dilution). Because homozygous GATA-4 knockout is embryonic lethal at day E.7.5, we were unable to evaluate factor X expression in GATA-4 null mice. It is likely that GATA-4 levels in heterozygotes are adequate for normal factor X expression.Sp1 and Sp3 bind site 3 and site 4 Two protein-protected sites in the factor X promoter, site 3 at 165 to 132 and site 4 at 195 to 169, were delineated in our
previous report by DNase footprinting analysis. However, the identities
of the proteins binding at these sites were not determined. The
promoter fragment lacking site 3 and site 4 that is, a fragment containing 121 to 1 of the factor X promoter confers 22.8% of the
maximal promoter activity in HepG2 cells. This suggests that proteins
binding at site 3 and site 4 may be important for the promoter activity
of factor X. We performed gel mobility shift assays to determine
whether liver extracts bind oligonucleotides derived from site 3 and
site 4. To our surprise, site 3 and site 4 oligonucleotides give rise
to identical mobility patterns when incubated with liver nuclear
extracts, suggesting that the same proteins bind at these 2 sites
(Figure 4A-B). The 3 DNA-protein complexes are sequence-specific because the addition of the unlabeled oligonucleotide (lanes 1 to 4, self) abolishes complex
formation. Closer inspection of the sequences reveals that the centers
of site 3 and site 4 are G rich. This observation raises the
possibility that Sp1 and related Sp proteins bind site 3 and site 4. Indeed, the addition of an unlabeled Sp1 consensus site eliminates
the complex formation at both site 3 and site 4 (lanes 5 and 6).
Because Sp1 and Sp3 are the 2 ubiquitous Sp proteins among family
members, we investigated the possibility that Sp1 and Sp3 are the
proteins binding at site 3 and site 4. The addition of an antibody
against Sp1 supershifts the slowest migrating band (complex 1, lanes 7 and 8). The addition of an antibody against Sp3 supershifts both complex 2 and complex 3 (lanes 9 and 10). This is consistent with the
finding that at least 2 forms of Sp3, a full-length and a truncated
form, are expressed in cells.15 The addition of both antibodies abolishes the formation of all 3 complexes (lanes 11 and
12). Together, these results show that Sp1 and Sp3 bind at site 3 and
site 4 and may regulate the activity of the factor X promoter.
Sp1/Sp3 binding to site 3 and site 4, but not site 1, is important for the factor X promoter activity To determine whether Sp1/Sp3 binding at the factor X promoter is functionally significant, mutations that abolish Sp1/Sp3 binding were introduced in the factor X promoter reporter constructs and analyzed in reporter gene assays in HepG2 cells (Figure 5A). Mutation at site 3 (m3) moderately reduces the promoter activity to 53% of wild type. Similarly, mutation at site 4 (m4) also reduces the promoter activity to 53%. However, simultaneous mutations at site 3 and site 4 (m3 + 4) reduces the promoter activity to 12% of wild type. We have previously shown that Sp1/Sp3 also bind at site 1. Mutation of the Sp1 sequence in site 1 does not have a significant effect on factor X promoter activity (77% of wild type).7 To determine whether the significance of Sp1 binding at site 1 can only be revealed when sites 3 and 4 are disrupted, we installed a mutation in the Sp1 binding site in site 1 in the context of site 3 mutant (m3) and site 4 mutant (m4). Introduction of the site 1 mutant affected the promoter activity of m3 and m4 only modestly (compare m1 + 3 to m3 and m1 + 4 to m4). Similarly, introduction of the site 1 mutant to m3 + 4 did not significantly reduce the promoter activity (compare m1 + 3 + 4 to m3 + 4). These results are consistent with the previous finding that Sp1 binding at site 1 does not contribute significantly to the promoter activity of factor X. In contrast, Sp1/Sp3 binding at site 3 and site 4 is important for the activity.
Both Sp1 and Sp3 are positive regulators of the factor X promoter Because Sp1 and Sp3 recognize identical sequences, we could not discern which of the Sp factors is a positive regulator of the factor X promoter based on the promoter reporter analysis in Figure 5A. We therefore performed transactivation experiments in Drosophila SL2 cells, which lack endogenous Sp proteins. As shown in Figure 5B, both Sp1 and Sp3 transactivate the factor X promoter significantly (16-fold by Sp1 and 205-fold by Sp3). Consistent with the results in Figure 5A, the mutant construct (m3 + 4) that does not bind Sp proteins demonstrates a markedly reduced response to Sp protein stimulation. We also carried out transactivation experiments by Sp1/Sp3 in HepG2 cells. Transfection with Sp1/Sp3 expression plasmids did not stimulate factor X promoter activity (data not shown). It is likely that endogenous Sp1 and Sp3 are already saturating the binding sites on the factor X promoter reporter, so that there is no further increase in activity on transfection of the Sp1/Sp3 expression vectors.
Factor VII, factor IX, and factor X share a high degree of
similarity in terms of their gene organization and protein structural domains, suggesting that they derived from a common ancestral gene. We
have previously shown that they also share a common transcriptional cis element, namely, the HNF-4 binding site. However, the
steady-state factor X mRNA level in the liver is significantly higher
than that of factor VII,7 suggesting that different
mechanisms are involved in the regulation of expression of these genes.
To extend our understanding of the transcriptional control of factor X, we undertook a complete characterization of its promoter region. We
have previously identified HNF-4 and NF-Y as crucial activators of the
factor X promoter; in this report, we identified GATA-4, Sp1, and Sp3
as additional positive regulators. Our current understanding of the
regulation of the factor X promoter is summarized in Figure 6.
We found that GATA-4 binds a canonical GATA site at We also found that the ubiquitous factors Sp1 and Sp3 bind at both site 3 and site 4 of the factor X promoter (Figure 4). Disruption of Sp1/Sp3 binding to site 3 and site 4 severely reduces factor X promoter activity, indicating that these sites are important (Figure 5A). Sp3 is a bifunctional protein; in many promoter contexts, it acts primarily as a repressor.15 To determine whether only Sp1 is the positive regulator of the factor X promoter, we introduced both Sp1 and Sp3 together with the factor X promoter constructs into Drosophila SL2 cells (Figure 5B). We found that both Sp1 and Sp3 act as potent activators of the factor X promoter. Although both Sp1 and Sp3 are widely expressed, their modification and expression in liver are subject to regulation. For example, Sp1 is phosphorylated on terminal differentiation of the liver,20 and this phosphorylation results in decreased DNA binding activity of the protein. During liver regeneration, Sp1 is rapidly dephosphorylated, and increased DNA binding ensues. It can be envisioned that the expression of factor X can be regulated through phosphorylation and dephosphorylation of Sp1. The levels of Sp3 protein in liver were shown to increase significantly after birth.21 This increase may also contribute to the fetal to postnatal increases in factor X expression. Certainly it is possible that Sp1 and Sp3 may also be responsible for the low level of extrahepatic expression of factor X.7 In summary, our findings provide novel insights into how GATA-4 may
contribute to the liver-specific expression of factor X. Importantly,
the contribution of GATA-4 to the expression of clotting factors may
not be limited to factor X. In addition to the aforementioned GATA
binding site in the factor VIII promoter,17 we have also
found a putative GATA binding site in the factor VII promoter at
We thank Dr Tetsuya Yamagata for the GATA-4 cDNA, Dr Jon Horowitz for the pPacSp1 and Sp3 expression plasmids, Dr Jeffrey Leiden for the plasma from GATA-4 knockout mice, and Dr Merlin Crossley for Drosophila SL2 cells.
Submitted August 22, 2000; accepted October 12, 2000.
Supported by National Institutes of Health grants NHLBI R01 48322 (K.A.H.) and NHLBI K08 03661 and Doris Duke Charitable Foundation grant T98062B (E.S.P.).
The publication costs of this article were defrayed in part by page charge payment. Therefore, and solely to indicate this fact, this article is hereby marked "advertisement" in accordance with 18 U.S.C. section 1734.
Reprints: Katherine A. High, Division of Hematology, 310 Abramson Pediatric Research Center, The Children's Hospital of Philadelphia, 34th St and Civic Center Blvd, Philadelphia, PA 19104; e-mail:high{at}emailchop.edu.
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© 2001 by The American Society of Hematology.
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