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Blood, 1 May 2001, Vol. 97, No. 9, pp. 2741-2749

IMMUNOBIOLOGY

Signal-regulatory protein alpha  (SIRPalpha ) but not SIRPbeta is involved in T-cell activation, binds to CD47 with high affinity, and is expressed on immature CD34+CD38minus hematopoietic cells

Martina Seiffert, Peter Brossart, Charles Cant, Marina Cella, Marco Colonna, Wolfram Brugger, Lothar Kanz, Axel Ullrich, and Hans-Jörg Bühring

From the University of Tübingen, Department of Internal Medicine II, Division of Hematology, Immunology, and Oncology, Tübingen, Germany; Max-Planck Institute for Biochemistry, Department of Molecular Biology, Martinsried, Germany; and Basel Institute for Immunology, Basel, Switzerland.


    Abstract
Top
Abstract
Introduction
Materials and methods
Results
Discussion
References

Signal-regulatory proteins (SIRPs) represent a new family of inhibitory/activating receptor pairs. They consist of 3 highly homologous immunoglobulin (Ig)-like domains in their extracellular regions, but differ in their cytoplasmic regions by the presence (SIRPalpha ) or absence (SIRPbeta ) of immunoreceptor tyrosine-based inhibitory motifs (ITIMs). To analyze the differential expression on hematopoietic cells, function and ligand binding capacity of SIRPalpha and SIRPbeta molecules, soluble fusion proteins consisting of the extracellular domains of SIRPalpha 1, SIRPalpha 2, and SIRPbeta 1, as well as SIRPalpha /beta -specific and SIRPbeta -specific monoclonal antibodies (MoAbs) were generated. In contrast to SIRPalpha 1 and SIRPalpha 2, no adhesion of SIRPbeta 1 to CD47 could be detected by cell attachment assays and flow cytometry. Using deletion constructs of SIRPalpha 1, the epitope responsible for SIRPalpha 1 binding to CD47 could be confined to the N-terminal Ig-like loop. Flow cytometry analysis with SIRPalpha /beta - and SIRPbeta -specific MoAbs revealed that SIRPalpha but not SIRPbeta is expressed on CD34+CD38- hematopoietic cells. In addition, a strong SIRPalpha expression was also observed on primary myeloid dendritic cells (DCs) from peripheral blood as well as on in vitro generated DCs. Analysis of the T-cell stimulatory capacity of in vitro generated DCs in the presence of soluble SIRPalpha 1 fusion proteins as well as SIRPalpha /beta -specific and CD47-specific MoAbs revealed a significant reduction of T-cell proliferation in mixed lymphocyte reaction and inhibition of induction of primary T-cell responses under these conditions. In contrast, soluble SIRPalpha or SIRPbeta -specific antibodies had no effect. The data suggest that the interaction of SIRPalpha with CD47 plays an important role during T-cell activation and induction of antigen-specific cytotoxic T-lymphocyte responses by DCs. (Blood. 2001;97:2741-2749)

© 2001 by The American Society of Hematology.

    Introduction
Top
Abstract
Introduction
Materials and methods
Results
Discussion
References

Signal-regulatory proteins (SIRPs) comprise a novel transmembrane glycoprotein family involved in receptor tyrosine kinase-coupled signaling pathways.1 These molecules are also called SHPS-1 (src homology 2 domain-containing phosphatase substrate-1),2 BIT (brain immunoglobulin [Ig]-like molecule with a tyrosine-based activation motif),3 P84,4 and MFR (macrophage fusion receptor).5 Structurally, all SIRP members share a large extracellular region with 3 Ig-like loops.1 The cytoplasmic domains of SIRPalpha subfamily members display 2 immunoreceptor tyrosine-based inhibitory motifs (ITIMs).1 These ITIM regions, which are also present on other inhibitory receptor molecules, recruit src homology 2 domain-containing phosphatases SHP-21,2 and SHP-16,7 and negatively regulate signal transduction cascades. Although SIRPalpha 1 is known to inhibit receptor tyrosine kinase-coupled signaling pathways,1 it can also positively regulate the mitogen-activated protein kinase (MAPK) pathway in response to insulin and potentiate integrin-induced MAPK activation.8,9 Thus, under certain circumstances SIRPalpha 1 is involved in activating rather than in inhibiting processes.

In contrast to SIRPalpha molecules, members of the SIRPbeta subfamily express only short cytoplasmic domains and lack inhibitory ITIM regions.1 SIRPbeta molecules are characterized by a single basic lysine residue within the hydrophobic transmembrane domain, a feature that is reminiscent of a group of activating receptors expressed on natural killer cells. These receptors interact with small intracellular adapter proteins that transduce activating signals via their immunoreceptor tyrosine-based activation motif (ITAM).10,11 Very recently, the DAP12 protein was identified as the ITAM-containing adapter protein for SIRPbeta 1.12,13

Several reports describe the expression and function of SIRP in neuronal tissues and on myeloid cells.3,5,14-17 Recently, we have identified CD47, an integrin-associated protein (IAP), as an extracellular ligand for human SIRPalpha 1 and SIRPalpha 2.17 In addition, an interaction of IAP with P84 was described in the rat.18 SIRP is involved in adhesive processes, like the extension of neurites on SIRP-coated substrate,3 the fusion of macrophages,5 the binding of SIRP+ dendritic cells (DCs) to CD4+ T cells,14 and the attachment of hematopoietic cells to immobilized SIRPalpha 1 protein.17 As a result of cell adhesion, SIRPalpha 1 phosphorylation was observed in macrophages as well as in nonhematopoietic cells.19,20

Because the extracellular domains of SIRPalpha and SIRPbeta molecules are highly homologous, it was plausible that both subfamily members interact with the same extracellular ligand. However, cell attachment and flow cytometric assays revealed that SIRPbeta 1 does not bind at high affinity to CD47 at detectable levels. Using SIRPbeta -specific monoclonal antibodies (MoAbs) we also analyzed differential expression of SIRPalpha and SIRPbeta on hematopoietic cell subsets and show that SIRPalpha but not SIRPbeta 1 is expressed on early CD34+CD133+ hematopoietic stem/progenitor cells. Finally, we show the involvement of SIRPalpha -CD47 interactions in the activation of T cells by DCs.


    Materials and methods
Top
Abstract
Introduction
Materials and methods
Results
Discussion
References

Cells

Bone marrow (BM) and peripheral blood (PB) cells from healthy donors and patients with acute or chronic myeloid leukemia (AML or CML) were obtained after informed consent according to the guidelines of the local ethics committee in Tübingen. Buffy coat PB cells from normal volunteers were obtained from the Transfusion Department, Tübingen, Germany, according to institutional guidelines. Mononuclear cells were isolated on a Ficoll-Hypaque density gradient (1.077 g/mL) by collecting the interphase cells. For immunofluorescence labeling of PB lymphocytes, monocytes, and granulocytes, lysing reagent without fixative from Immunotech (Marseilles, France) was used to remove erythrocytes.

The human leukemic cell lines HL60, KG1a, K562, M07e, 207, Daudi, CCRF-CEM, Jurkat, and Molt-4 were obtained from the American Type Culture Collection (Rockville, MD). The murine myeloma cell line, SP2/0, and the human leukemic cell lines EM2, U937, and LAMA-84, were obtained from the DSMZ (Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH, Braunschweig, Germany). All cell lines were grown in RPMI 1640 culture medium (Gibco-BRL, Eggenstein, Germany) supplemented with 10% fetal calf serum (FCS) and antibiotics. Cells were cultured at 37°C and 5% CO2.

The NIH-3T3 cells were transfected with the complete coding sequence of the human SIRPalpha 1 complementary (cDNA) (NIH-3T3/huSIRP1) as described previously.1 The complete DNA sequence coding for SIRPbeta 1 was transfected into 293E cells by the calcium phosphate method.21 Cells were grown and selected in Dulbecco modified Eagle medium (DMEM) supplemented with 10% FCS and 1 mg/mL G418 (Sigma, Deisenhofen, Germany) for 2 weeks. A single high-expressing 293E/huSIRPbeta 1 clone was chosen for the screening of MoAb hybridoma supernatants.

The DCs were generated in vitro as described.22 Briefly, monocytes were isolated from mononuclear PB cells by adhesion to culture dishes for 2 hours at 37°C. After removing nonadherent cells, RPMI 1640 medium supplemented with 10% FCS, antibiotics, interleukin (IL)-4 (1000 IU/mL; Genzyme, Cambridge, MA) and granulocyte-macrophage colony-stimulating factor (GM-CSF) (Leukomax, 10 ng/mL; Novartis, Basel, Switzerland) was added. Cell cultures were fed with fresh medium and cytokines every second day, and dendritic cells were collected after 7 days of culture.

Recombinant SIRPalpha 1, SIRPalpha 2, and SIRPbeta 1 proteins

GST fusion proteins of SIRPalpha 1, SIRPalpha 2, and SIRPbeta 1 were produced as previously described.17 Primers used for the amplification of SIRPbeta extracellular domain were as follows: Forward primer: 5'-GCGGAATTCGCCACCATGCCCGTGCCAGCCTCC-3', reverse primer: 5'-CCGCTCGAGAGCAGTAGGAGCCAGCGC-3'. Briefly, cDNAs coding for the extracellular domains of SIRPalpha 1, SIRPalpha 2, and SIRPbeta 1 were cloned into the pSj26(mod) vector, which was derived from the pCDNA3 cloning vector (Invitrogen, Groningen, The Netherlands). The resultant expression plasmids were transfected into 293E cells by the calcium phosphate method.21 Cells were grown and selected in DMEM supplemented with 10% FCS and 1 mg/mL G418 (Sigma) for 2 weeks. Surviving clones were tested for expression and secretion of fusion protein by Western blotting. High-expressing clones were used to produce SIRPalpha 1ex-, SIRPalpha 2ex-, and SIRPbeta 1ex-GST fusion proteins, which were purified from cell supernatants with glutathione Sepharose (Pharmacia Biotech, Freiburg, Germany).

Cell adhesion assay

Adhesion of leukemic cell lines and primary hematopoietic cells to SIRPalpha 1ex, SIRPalpha 2ex, and SIRPbeta 1ex was performed as described previously.23 Briefly, the protein solutions were immobilized onto nitrocellulose-coated plastic dishes (35-mm diameter) by air-drying at room temperature. Nonspecific binding of cells to nitrocellulose was prevented by blocking with 1% bovine serum albumin (BSA) solution in phosphate-buffered saline (PBS). A total of 3 × 106 hematopoietic cells in serum-free RPMI 1640 medium was allowed to adhere to the immobilized protein for 1 hour at 37°C. Nonadherent cells were removed by gently rinsing the dishes with warm PBS. Specific cell binding was evaluated under a Zeiss Axiovert microscope (Carl Zeiss, Göttingen, Germany). Photographs of representative fields were taken.

To inhibit cell adhesion, immobilized SIRP fusion proteins were preincubated with different SIRPalpha /beta -reactive MoAbs for 30 minutes at 37°C, before cell attachment in the presence of the antibodies was performed.

Transient overexpression of SIRPalpha 1 deletion constructs in 293E cells

For the production of the deletion constructs SIRPalpha 1Ig1 and SIRPalpha 1Ig2-3 the following primers were used:

Forward primers: SP6: 5'-CATACGATTTAGGTGACACTATAG-3'; J6: 5'-GGATCCGCCCCCGTGGTATCGGGCCC-3'; J3: 5'-CGCGGATCCGCCCACCCGAAGGAGCAGGGC-3'.

Reverse primers: J1: 5'-CCGATTCGCCGCTCGAGTCACTGCCTCGGGACCTGG-3'; J2: 5'-GGATCCAGCTGCAACTGATACGGAC-3'; J7: 5'-GGATCCCGATACCACGGGGGCAGAGG-3'.

Sequence corresponding to the signal peptide was amplified by polymerase chain reaction (PCR) from the SIRPalpha 1 cDNA in pRK5RS1 using primers SP6 and J2 and cloned into pCDNA3. A single fragment containing the sequence corresponding to Ig-like domains 2 and 3 and remaining downstream coding region were amplified with J6 and J1 and cloned into pCDNA3 behind the signal peptide insert to give SIRPalpha 1Ig2-3. Sequence corresponding to the signal peptide and first Ig-like domain was amplified from SIRPalpha 1 cDNA with primers SP6 and J7 and cloned into pCDNA3. The portion of the cDNA coding for downstream sequence beginning at the transmembrane domain was amplified with primers J6 and J1 and cloned into pCDNA3 behind the Ig1 insert to give SIRPalpha 1Ig1.

The deletion plasmids SIRPalpha 1Ig1 and SIRPalpha 1Ig2-3 were transfected into 293E cells by the calcium phosphate method.21 Cells were harvested after 2 days and immunofluorescence labeling with SIRP-reactive MoAbs was performed.

Immunization and hybridoma production

The MoAbs SE5A5, SE7C2, SE8A3, SE11A6, SE12B6, SE12C3, and P3C4 were generated by immunization with SIRPalpha 1 fusion proteins, as described previously.17 MoAbs B1D5 and B4B6 were raised in a 4- to 8-week-old female Balb/c mouse by immunization with a recombinant GST fusion protein containing the whole extracellular domain of SIRPbeta 1. Fifty micrograms protein diluted 1:2 in ABM-2 adjuvant solution (Pansystems, Aidenbach, Germany) was applied intramuscularly 3 times in 14-day intervals. The spleen was removed 4 days after the last injection for fusion with the SP2/0 myeloma cell line. The resulting hybridoma cells were grown in RPMI 1640 culture medium containing 10% FCS, antibiotics, and hypoxanthine, aminopterin, and thymidine (HAT; Sigma). Culture supernatants were screened by flow cytometric analysis on 293E/huSIRPbeta 1 cells, and positive hybridoma cells secreting antibodies selectively recognizing the SIRPbeta 1 transfectant cell line, but not the parental 293E cells, were cloned by limiting dilution. The selected hybridoma cells were further screened for cross-reactivity with SIRPalpha 1. Two of 13 selected clones exclusively recognized 293E/huSIRPbeta 1 cells, but not NIH-3T3/huSIRPalpha 1 cells. These 2 clones, B1D5 and B4B6, were cultured in Integra CL1000 culture flasks (Integra Biosciences, Fernwald, Germany) and antibodies were purified from supernatants using protein G Sepharose columns (Pharmacia Biotech). The isotypes of the MoAbs were determined by flow cytometry analysis using phycoerythrin (PE)-conjugated isotype-specific secondary antisera for staining (Southern Biotechnology, Birmingham, AL).

MoAbs were biotinylated by adding 6-((6-((biotinoyl)amino)hexanoyl)amino)hexanoic acid, sulfosuccinimidyl ester, sodium salt (Mobitec, Göttingen, Germany) to the protein solution in 0.1 M sodium bicarbonate buffer, pH 8.3, at a molar ratio of 1:100 (MoAb/biotin). After 2 hours of incubation, unbound biotin was separated from the biotinylated antibodies by gel filtration on a Sephadex G25 column (Pharmacia Biotech).

Immunofluorescence labeling and flow cytometry analysis

Indirect staining of cells. Cells from growing cell lines or primary mononuclear cells from BM and PB were washed in PBS supplemented with 0.1% BSA and 0.1% sodium azide (FACS buffer). In the next step, cells were incubated with 20% human AB serum for 10 minutes at 4°C to prevent unspecific binding of mouse antibodies. Cells were then incubated with 10 µg/mL of the primary antibody for 30 minutes on ice. After washing 2 times with FACS buffer, cells were stained with PE-conjugated goat antimouse IgG1 or IgG2a antiserum (Southern Biotechnology) for 30 minutes at 4°C. After washing twice, cells were suspended in FACS buffer and analyzed on a FACSCalibur flow cytometer (Becton Dickinson, Heidelberg, Germany).

Two-color staining of cultured DCs and PB and BM cells. Mononuclear PB and BM cells of healthy donors or patients with AML, as well as cultured DCs, were labeled with MoAb P3C4 or B1D5 (both IgG2a) and fluorescein isothiocyanate (FITC)- or PE-conjugated goat antimouse IgG2a-specific antiserum (Caltag, San Francisco, CA) as described above. In addition, FITC-conjugated antibodies against CD1a (WM35) (Peli Cluster, Amsterdam, The Netherlands), CD14 (MPhi P9), and CD45 (2D1) (Becton Dickinson), or PE-conjugated antibodies against CD19, (4G7) CD33 (P67.6), and CD34 (8G12) (Becton Dickinson), as well as the MoAb AC133-PE (Miltenyi Biotec, Bergisch Gladbach, Germany) were used for fluorescence labeling of the cells. The stained cells were analyzed on a FACSCalibur flow cytometer using the Cellquest software (Becton Dickinson).

Four-color staining of BM cells. To analyze SIRP and CD133 expression on CD34+CD38- BM cells, mononuclear cells from healthy donors were stained with anti-CD34-PerCP (8G12), anti-CD38-APC (HB7; Becton Dickinson), CD133-PE (W6B3; our laboratory; http://gryphon.jr2.ox.ac.uk/cdlistings.htm), and either P3C4 (anti-SIRPalpha /beta ), or B1D5 (anti-SIRPbeta ). In the next step cell-bound anti-SIRP antibodies (both IgG2a) were stained with anti-IgG2a-FITC antiserum. After washing, cells were analyzed on a FACSCalibur flow cytometer.

Four-color staining of PB cells. To detect primary DC subsets in peripheral blood, 4-color analysis was performed on total blood as previously reported.24 Briefly, blood cells were stained with anti-ILT1 antibody,24 followed by FITC-labeled multiple adsorbed goat antirat antibody (Pharmingen, San Diego, CA). After washing, cells were labeled with PCy5-conjugated anti-CD3 (UCHT1), -CD14 (RMO52), -CD16 (3G8), -CD19 (B9E6), and -CD56 MoAb (N901) (Immunotech), PE-conjugated anti-ILT3 MoAb (ZM3.8) (Immunotech), as well as with biotinylated MoAbs SE5A5 and B1D5. In the final step, streptavidin-allophycocyanin (Molecular Probes, Eugene, OR) was added. Red blood cells were lysed with FACS Lysing Solution (Becton Dickinson) and analyzed on a FACSCalibur flow cytometer.

Immunoprecipitation and Western blot analysis

To determine the specificity of our SIRP-reactive MoAbs, 1 µg SIRPalpha 1ex or SIRPbeta 1ex protein was incubated with 5 µg antibody for 1 hour at 4°C. Immunoprecipitation was performed overnight at 4°C using 100 µL protein A Sepharose solution (Sigma) for each MoAb. The antibody-Sepharose complexes were washed 6 times with Tris-buffered saline (TBS: 10 mmol/L TrisHCl, pH 7.5, 100 mmol/L NaCl), and bound proteins were eluted with reducing Laemmli sample buffer.25 Western blot analysis was performed as described previously.17 Briefly, eluted proteins were separated by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and transferred to nitrocellulose. After blocking the membrane with 3% BSA in TTBS (TBS + 0.1% Tween 20), a polyclonal SIRP-reactive antiserum1 was used as primary antibody, followed by incubation with alkaline phosphatase-conjugated goat antirabbit antiserum (Sigma). Detection of immunoprecipitated SIRP proteins was performed with BCIP/NBT (5-bromo-4-chloro-3-indolylphosphate p-toluidine salt/nitro blue tetrazolium chloride) Sigma Fast Tablets.

Mixed lymphocyte reaction assay

Responding cells (1.5 × 105) from allogeneic PB mononuclear cells were cultured in flat-bottomed 96-well microplates with 5 × 102 DCs. Control and inhibitory antibodies (anti-CD47, anti-SIRPalpha /beta , anti-SIRPbeta ) were added to the cultures at concentrations of 100 µg/mL. Soluble SIRPalpha 1ex and SIRPbeta 1ex proteins were used at 25 µg/mL. Thymidine incorporation was measured on day 5 by a 16-hour pulse with 3H-thymidine (0.5 µCi/well; Amersham Life Science, Buckingham, United Kingdom).

Induction of antigen-specific cytotoxic T lymphocyte response using HLA-A2 restricted synthetic peptides

The HLA-A2 binding peptides E75 (Her-2/neu, KIGSFLAFL, used for cytotoxic T lymphocyte (CTL) inductions) and the MUC1 peptide M1.1 (amino acids 950-958: STAPPVHNV, control peptide) were synthesized using standard Fmoc chemistry on a peptide synthesizer (432A, Applied Biosystems, Weiterstadt, Germany) and analyzed by reverse-phase high-performance liquid chromatography (HPLC) and mass spectrometry. For CTL induction 5 × 105 DCs were pulsed with 50 µg/mL of the synthetic Her-2/neu-peptide E75 for 2 hours, washed, and incubated with 2.5 × 106 autologous PB mononuclear cells in RPMI medium supplemented with 10% FCS. Control and inhibitory antibodies (anti-CD47 and anti-SIRPalpha /beta ) were added to the cultures at concentrations of 100 µg/mL. Soluble SIRPalpha 1ex, SIRPbeta 1ex, and control GST proteins were used at 25 µg/mL. Cells were restimulated after 7 days of culture and 1 ng/mL human recombinant IL-2 (Genzyme) was added every second day.26 The cytolytic activity of induced CTL was analyzed on day 5 after the last restimulation in a standard 51Cr-release assay.

CTL assay

The standard 51Cr-release assay was performed with some modifications as described.26 Target cells (Croft cells, an Epstein-Barr virus [EBV] immortalized B-cell line, kindly provided by O. J. Finn, University of Pittsburgh, Pittsburgh, PA) were pulsed with 25 µg/mL peptide (E75 as the cognate peptide and M1.1 as an irrelevant control peptide) for 2 hours and labeled with [51Cr]-sodium chromate in RP10 medium for 1 hour at 37°C. Cells (104) were transferred to a well of a round-bottomed 96-well plate. Varying numbers of CTL were added to give a final volume of 200 µL and incubated for 4 hours at 37°C. At the end of the assay supernatants (50 µL/well) were harvested and counted in a microbeta counter. The percent specific lysis was calculated as: 100 × (experimental release - spontaneous release/maximal release - spontaneous release). Spontaneous and maximal release were determined in the presence of either medium or 1% Triton X-100, respectively.

Statistical analysis

To determine the statistical significance of the results, t tests were performed.


    Results
Top
Abstract
Introduction
Materials and methods
Results
Discussion
References

CD47+ hematopoietic cells adhere to SIRPalpha 1ex and SIRPalpha 2ex, but not to SIRPbeta 1ex

We have previously shown that hematopoietic cells adhere to the extracellular domains of SIRPalpha 1 and SIRPalpha 2 via the transmembrane IAP CD47.17 To test whether SIRPbeta molecules show the same adhesive capacity, a GST fusion protein containing the whole extracellular domain of SIRPbeta 1 was generated. Cell attachment assays with this protein revealed however, that the CD47bright cell line Jurkat (Figure 1) and all the other tested CD47+ hematopoietic cell lines do not bind SIRPbeta 1ex. This result was confirmed by FACS analysis with biotinylated SIRPbeta 1ex protein, followed by streptavidin-PE staining. Whereas biotinylated SIRPalpha 1ex and SIRPalpha 2ex stained all tested CD47+ hematopoietic cell lines, no binding of biotinylated SIRPbeta 1ex was observed (data not shown). Because the extracellular Ig-like loops of SIRPalpha 1, SIRPalpha 2, and SIRPbeta 1 are highly homologous, single amino acid residues within these regions seem to be critical for CD47 binding. The fact that none of the tested CD47+ hematopoietic cell lines bind to SIRPbeta 1ex supports the hypothesis that SIRPbeta molecules do either not interact with CD47 or only at very low affinity below the detection level of our assays.


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Figure 1. Cell adhesion to SIRPalpha 1ex and SIRPalpha 2ex, but not to SIRPbeta 1ex. SIRP fusion proteins (2 µL of 20 µg/mL solutions) were immobilized on nitrocellulose-coated Petri dishes by air-drying. Adhesion of Jurkat cells to SIRPalpha 1ex, SIRPalpha 2ex, and SIRPbeta 1ex was analyzed by incubating the cells for 1 hour at 37°C, as described.17 Specific cell binding is shown in the round protein drop and was evaluated and photographed using a Zeiss Axiovert microscope (original magnification × 40; n = 3). SIRPalpha adhered to all tested CD47+ cell lines (HL-60, KG1a, K562, MO7e, 207, Daudi, CCRF-CEM, Molt-4, EM2, U937, and LAMA-84); adhesion of SIRPbeta was always negative.

SIRPalpha molecules interact with CD47 via their N-terminal immunoglobulinlike domain

To identify functional epitopes within the extracellular SIRPalpha domains, responsible for the interaction with CD47, deletion constructs containing either the N-terminal Ig-like domain of SIRPalpha 1 (SIRPalpha 1Ig1) or the second and third Ig-like loop (SIRPalpha 1Ig2-3), respectively, were transiently overexpressed in 293E cells. Transfected cells were used for immunofluorescence analysis with 7 previously described SIRPalpha /beta -reactive MoAbs.17 Five of these antibodies (SE5A5, SE7C2, SE11A6, SE12C3, and P3C4) recognized only 293E cells transfected with the SIRPalpha 1Ig1 construct, whereas the remaining 2 MoAbs (SE8A3 and SE12B6) exclusively bound to the SIRPalpha 1Ig2-3 transfectants (summarized in Table 1). In previous studies we could show that 3 of the SIRPalpha 1Ig1-specific antibodies blocked cell adhesion to immobilized SIRPalpha 1ex protein. Two of these antibodies also inhibited cell binding to SIRPalpha 2ex (SE5A5 and SE12C3), whereas MoAb SE7C2 exclusively inhibited adhesion to SIRPalpha 1ex. Interestingly, the 2 SIRPalpha 1Ig2-3-specific MoAbs SE8A3 and SE12B6 selectively inhibited the CD47-SIRPalpha 2 interaction, whereas binding of SIRPalpha 1ex to CD47 remained unaltered. Thus, most likely SIRPalpha 1 exclusively utilizes the N-terminal Ig-like loop for binding to CD47, whereas SIRPalpha 2 additionally requires the second and/or third Ig-like domains.

                              
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Table 1. Antibody specificity and inhibitory capacity of different signal-regulatory protein alpha /beta -reactive monoclonal antibodies

Generation of SIRPbeta -specific MoAbs

To study cell surface expression of human SIRPalpha and SIRPbeta molecules, SIRPbeta -specific MoAbs were raised by immunization of a Balb/c mouse with the recombinant GST fusion protein SIRPbeta 1ex. Two antibodies, B1D5 and B4B6, were selected because of their specific reactivity with 293E cells transfected with SIRPbeta 1, but not with NIH-3T3/huSIRPalpha 1 transfectants, as determined by flow cytometric analysis (Figure 2A). The specificity of these antibodies was further confirmed by immunoprecipitation experiments followed by Western blotting with a SIRP-reactive polyclonal antiserum. Whereas all of the previously described SIRP-reactive MoAbs precipitated SIRPalpha 1ex and SIRPbeta 1ex (Figure 2B; SE5A5 is shown as an example), the 2 SIRPbeta -specific antibodies B1D5 and B4B6 exclusively immunoprecipitated SIRPbeta 1 protein.


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Figure 2. Specificity of MoAbs B1D5 and B4B6. (A) 293E/huSIRPbeta 1 and NIH/3T3/huSIRPalpha 1 cells were immunolabeled with MoAbs SE5A5, B1D5, and B4B6 and stained with PE-conjugated goat antimouse IgG1 or IgG2a antiserum (filled histograms). Nonbinding IgG1 and IgG2a antibodies were used as negative controls (black lines). Cells were analyzed on a FACSCalibur flow cytometer (n = 3). (B) Recombinant SIRPalpha 1ex and SIRPbeta 1ex protein was immunoprecipitated with MoAbs SE5A5, B1D5, and B4B6. Precipitated protein was separated by 12% SDS-PAGE and immunoblotted with a polyclonal antibody against SIRP (n = 3).

SIRPalpha and SIRPbeta are differentially expressed on PB and BM mononuclear cells

Previously, we showed differential SIRP expression on hematopoietic cells using MoAbs recognizing both SIRPalpha and SIRPbeta molecules.17 In this study we extended the analysis and differentiated between SIRPalpha and SIRPbeta expression using SIRPbeta -specific antibodies. Figure 3A shows that PB cells show a very similar expression pattern of both SIRP subfamily members, with a strong expression on monocytes and granulocytes, and almost no expression on lymphocytes. In contrast, the SIRPalpha bright myeloid dendritic cells generated in vitro show only a very weak SIRPbeta signal. Two-color analysis of BM cells with SIRPalpha /beta - and SIRPbeta -specific MoAbs shows coexpression of both SIRP subfamily members on a subset of CD19+ B-cell precursors and on CD33+ myeloid progenitor cells (Figure 3B). However, immature CD34++ and CD133+ hematopoietic cells almost exclusively express inhibitory SIRPalpha molecules. A similar selective expression of SIRPalpha was also observed on immature CD34+CD38-CD133+ hematopoietic progenitor cells (Figure 3C). This indicates that SIRPalpha but not SIRPbeta may play an important role in the regulation of early hematopoiesis.


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Figure 3. Expression of SIRPalpha and SIRPbeta on hematopoietic cells. (A) PB cells and in vitro-generated DCs were immunolabeled with MoAbs P3C4 (IgG2a) or B1D5 (IgG2a) and PE-conjugated goat antimouse IgG2a-specific antiserum (filled histograms). Nonbinding IgG2a antibody was used as negative control (black line). Cultured DCs were further labeled with FITC-conjugated CD1a-specific MoAb. Gated lymphocytes, monocytes, and granulocytes, as well as CD1a+ DCs were analyzed on a FACSCalibur flow cytometer (n = 3). (B) Ficoll- isolated BM cells were labeled with MoAbs P3C4 or B1D5 and stained with FITC-conjugated goat antimouse IgG2a-specific antiserum, as well as with PE-conjugated MoAbs against CD19, CD33, CD34, and AC133 antigen. Gated mononuclear cells were analyzed on a FACSCalibur flow cytometer (n = 3). (C) Expression of SIRP on CD34+CD38- BM cells. Cells were stained with CD34-FITC, CD38-APC, CD133-PE, and either P3C4 (SIRPalpha ) or B1D5 (SIRPbeta ) plus anti-IgG2a-FITC, and analyzed on a FACSCalibur flow cytometer. The plots show coexpression of CD133 and SIRP on gated CD34+CD38- cells.

SIRPalpha and SIRPbeta expression is reduced on primary leukemic blasts

Compared to myeloid cells from normal PB and BM, the majority of myeloid leukemic blasts are either negative for SIRPalpha /beta or express it at highly reduced levels.17 Using the new SIRPbeta -specific MoAbs, a weak SIRPbeta expression was observed on only 2 of 10 analyzed acute myeloid leukemia samples (Figure 4). Both SIRPbeta + probes were from patients with AML of the FAB (French-American-British) classification type M4/M5, and were also strongly positive for SIRPalpha . All the other analyzed AML samples of FAB types M0-M3 were negative for SIRPbeta . These cells showed also a negative or reduced SIRPalpha expression. Together these data show, that not only the expression of inhibitory SIRPalpha molecules,21 but also of activating SIRPbeta proteins is reduced on myeloid leukemic blasts.


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Figure 4. SIRPalpha and SIRPbeta expression on AML blasts. Ficoll-isolated PB or BM cells from patients with AML were immunolabeled with MoAb P3C4 or B1D5, followed by PE-conjugated goat antimouse IgG2a-specific antiserum (filled histograms). Nonbinding IgG2a antibody was used as negative control (black line). Cells were further stained with FITC-conjugated CD45-specific MoAb and gated CD45low leukemic blasts were analyzed. AML samples were divided into 3 groups: (1) normal SIRPalpha /beta expression; (2) reduced SIRPalpha , no SIRPbeta expression; (3) no SIRPalpha /beta expression. The histograms show representative examples of each group. The number of analyzed samples is given in parentheses.

Differential expression of SIRPalpha and SIRPbeta on primary PB DCs

To determine whether primary DCs express SIRPalpha and/or SIRPbeta , we stained lineage-negative PB cells with anti-ILT3 and anti-ILT1 antibodies, which allow us to identify plasmacytoid DCs (lin-/ILT1-/ILT3+) and myeloid DCs (lin-/ILT1+/ILT3+) (Figure 5).24 SIRPalpha was expressed on both DC subsets, myeloid DCs having a higher level of expression. SIRPbeta was expressed on a very small fraction of plasmacytoid DCs (~5%-10%), and on a significant percentage of myeloid DCs, varying from 30% to 70% in different individuals. The strong expression of SIRPalpha on primary and cultured myeloid DCs indicated a possible role for this surface receptor in the generation of immune responses.


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Figure 5. Differential expression of SIRPalpha and SIRPbeta on distinct subsets of primary DCs. Cells from whole blood were stained with anti-ILT1 antibody followed by FITC-labeled goat antirat antibody. After washing, cells were labeled with PCy5-conjugated anti-CD3, -CD14, -CD16, -CD19, and -CD56 MoAb; PE-conjugated anti-ILT3 MoAb; and biotinylated MoAbs SE5A5 and B1D5 or a biotinylated control antibody. In the final step, streptavidin-allophycocyanin was added. Primary DCs in human PB are included within lineage (lin)-/low side-scatter cells (top left). Differential expression of ILT1 and ILT3 receptors on these cells allows the identification of 2 distinct subsets of primary DCs (top right). ILT3+ILT1- cells correspond to plasmacytoid dendritic cells. ILT3+ILT1+ cells correspond to myeloid DCs. SIRPalpha (analyzed with MoAb SE5A5) is expressed on both subsets and is particularly bright on ILT3+ILT1+ DCs. SIRPbeta (analyzed with MoAb B1D5) is expressed on a significant percentage of ILT3+ILT1+ DCs (30%-70% in different individuals) and only on few ILT3+ILT1- DCs (5%-10%). Bars on the left of the histograms indicate the region in which 99% of the control cells stained with isotype-matched control antibodies were found.

SIRPalpha is involved in DC-mediated T-cell activation

To determine whether SIRPalpha /CD47 interactions play a role in mixed lymphocyte reactions, we analyzed the influence of inhibitory SIRPalpha /beta - and CD47-reactive MoAbs on the capacity of cultured DCs to stimulate alloreactive T cells. Both, SIRPalpha /beta -reactive (P = .0119) and CD47-reactive antibodies (P = .0035) significantly reduced T-cell proliferation (Figure 6). Soluble SIRPalpha 1ex protein at a concentration of 25 µg/mL reduced T-cell proliferation to less than 50% (P = .001), whereas anti-SIRPbeta antibody B1D5 (P = .9653) and the soluble SIRPbeta 1ex protein (P = .4828) had no effect on T-cell proliferation in the mixed lymphocyte reaction (MLR). These data show SIRPalpha and CD47 are involved in T-cell activation induced by DC.


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Figure 6. MLR in the presence of SIRPalpha /beta - or CD47-specific MoAbs or soluble SIRPalpha 1ex. Responding cells (1.5 × 105) from allogeneic PB mononuclear cells were cultured with stimulator cells (DCs) in the presence of control (IgG1) antibody, antibody B1D5 specific for SIRPbeta inhibitory antibodies specific for CD47 (CC2C6) and SIRPalpha /beta (SE5A5), or soluble SIRPalpha 1ex and SIRPbeta 1ex protein. Thymidine incorporation was measured on day 5 by a 16-hour pulse with 3H-thymidine. The results show the means and SDs from a representative experiment in cpm (n = 6 replicates).

To further analyze the influence of soluble SIRPalpha 1ex and SIRPbeta 1ex proteins as well as inhibitory CD47-reactive and SIRPalpha /beta -reactive antibodies on the ability of DCs to induce a primary CTL response against a tumor-associated antigen, DCs were pulsed with the synthetic E75 peptide derived from the HER-2/neu antigen and used as antigen-presenting cell (APC) for CTL induction in vitro. As demonstrated in Figure 7 the in vitro generated CTL efficiently lysed Croft cells pulsed with the cognate E75 peptide but not target cells presenting an irrelevant MUC1 peptide. The addition of an inhibitory antibody against CD47 (Figure 7G) or SIRPalpha /beta (Figure 7E) to the cell cultures during the in vitro priming reduced the cytotoxic activity of the induced T cells. The presence of the soluble SIRPalpha 1ex protein (Figure 7F) almost completely abolished the induction of antigen-specific CTL. In line with the results obtained from the MLR soluble SIRPbeta 1ex protein and mAb specific for SIRPbeta had no effect on the interaction between T cells and DC.


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Figure 7. HER-2/neu-specific CTL responses induced with peptide-pulsed DCs. In vitro generated DCs were pulsed with the E75 synthetic peptide derived from Her-2/neu and used as APC to induce a primary MHC class I restricted CTL response in vitro. Control antibody (A), SIRPbeta -specific MoAb B1D5 (C), and the inhibitory MoAbs against SIRPalpha /beta (SE5A5) (E) and CD47 (G), as well as soluble proteins (control, B), soluble SIRPbeta 1ex (D), SIRPalpha 1ex protein (F) were added to the cultures during the in vitro priming. Cytotoxic activity of induced CTL was determined after 2 restimulations in a standard 51Cr-release assay using Croft cells pulsed with the cognate E75 peptide (black-square) or irrelevant M1.1 peptide () as targets.


    Discussion
Top
Abstract
Introduction
Materials and methods
Results
Discussion
References

Signal-regulatory proteins were initially described as negative regulators of receptor tyrosine kinase-coupled signaling pathways.1 More detailed analysis revealed, however, that SIRPs can be classified into 2 groups: SIRPalpha proteins that contain ITIMs and SIRPbeta proteins that lack these inhibitory motifs.1 Very recently, SIRPbeta 1 was identified as an activating receptor, which associates with the small transmembrane adapter protein DAP12 and transduces stimulatory signals.12,13 Thus, SIRPalpha and SIRPbeta molecules represent another pair of inhibitory and activating receptors. Such pairs are also described for killer cell Ig-like receptors (KIRs),27,28 Ig-like transcripts (ILTs),29,30 or paired Ig-like receptors (PIRs).31,32 The extracellular regions of each of these receptor pairs are highly homologous. Therefore the existence of a common ligand for both SIRPalpha and SIRPbeta was likely. Unexpectedly, we could show that the extracellular domain of the activating receptor SIRPbeta 1 does either not, or only at very low affinity, interact with the previously described SIRPalpha ligand CD47, although a high sequence similarity between the extracellular domains of SIRPalpha and SIRPbeta molecules has been described.1 Further studies with more sensitive methods are in progress to test whether SIRPbeta binds at very low affinity to CD47, or whether additional cofactors/coligands are required for CD47 binding. In line with the observation of differential binding of SIRPs to CD47 is the fact that activating KIRs do not bind to HLA class I molecules, which are ligands for inhibitory KIRs.33 Further, the inhibitory CD94/NKG2A receptor has a higher binding affinity for HLA-E than the activating CD49/NKG2C receptor,34 although the extracellular domains of KIRs and NKG2 activating and inhibitory isoforms contain only subtle variations in their amino acid sequence. Hence, the distinct ligand recognition properties observed must depend on these single sequence variations.

Deletion constructs containing only defined regions of the extracellular SIRPalpha 1 domain were generated to localize the epitopes responsible for the SIRPalpha -CD47 interaction. Interestingly, we found that the ligand binding site of SIRPalpha 1 is localized within the N-terminal Ig-like loop, whereas the binding of SIRPalpha 2 to CD47 additionally requires the second and/or third Ig-like domain. This suggests that different members of the SIRPalpha group use different epitopes to interact with CD47. For a more precise localization of the SIRPalpha epitopes responsible for binding to CD47, the preparation of constructs with a few amino acids deletions will be crucial.

Because SIRPalpha and SIRPbeta molecules have opposing functional activity and distinct ligand binding properties, their differential tissue distribution may be a central issue to the understanding of their biological role. Thus, it was of particular interest to know whether both subfamily members are expressed in the same cell or whether certain cell types exclusively express SIRPalpha or SIRPbeta . We could previously show that SIRPalpha /beta is expressed on hematopoietic stem and/or progenitor cells, monocytes, granulocytes, and DCs. Because all antibodies used in the previous study recognize both SIRPalpha and SIRPbeta , expression analysis of subfamily members was not possible. In the present study