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Prepublished online as a Blood First Edition Paper on March 6, 2003; DOI 10.1182/blood-2002-09-2896.

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Submitted September 23, 2002
Accepted February 24, 2003

The detection of BCR-ABL mutations in imatinib-treated CML patients is virtually always accompanied by clinical resistance and mutations in the ATP phosphate-binding loop (P-loop) are associated with a poor prognosis

Susan Branford*, Zbigniew Rudzki, Sonya Walsh, Ian Parkinson, Andrew Grigg, Jeff Szer, Kerry Taylor, Richard Herrmann, John F Seymour, Chris Arthur, David Joske, Kevin Lynch, and Tim Hughes

Department of Molecular Pathology, Institute of Medical and Veterinary Science, Adelaide, SA, Australia
Department of Hematology, Royal Melbourne Hospital, Melbourne, VIC, Australia
Department of Hematology, Mater Hospital, Brisbane, QLD, Australia
Department of Hematology, Royal Perth Hospital, Perth, WA, Australia
Department of Hematology, Peter MacCallum Cancer Institute, Melbourne, VIC, Australia
Department of Hematology, Royal North Shore Hospital, Sydney, NSW, Australia
Department of Hematology, Sir Charles Gairdner Hospital, Perth, WA, Australia
Novartis Pharmaceuticals Australia, North Ryde Sydney, NSW, Australia

* Corresponding author; email: susan.branford{at}imvs.sa.gov.au.

Imatinib-treated chronic myeloid leukemia (CML) patients with acquired resistance commonly have detectable BCR-ABL kinase domain mutations. It is unclear whether patients who remain sensitive to imatinib also have a significant incidence of mutations. We evaluated 144 imatinib-treated patients for BCR-ABL kinase domain mutations by direct sequencing of 40 accelerated phase (AP), 64 late chronic phase (>=12 months from diagnosis, late-CP) and 40 early-CP patients. Mutations were detected in 27 patients at 17 different residues, 13/40 (33%) in AP, 14/64 (22%) in late-CP, and 0/40 in early-CP. Acquired resistance was evident in 24/27 (89%) patients with mutations. Twelve of 13 patients (92%) with mutations in the ATP binding loop (P-loop) died (median survival of 4.5 months after the mutation was detected). In contrast, only 3/14 (21%) patients with mutations outside the P-loop died (median follow-up of 11 months). As the detection of mutations was strongly associated with imatinib resistance we analyzed features that predicted for their detection. Patients who commenced imatinib >4 years from diagnosis had a significantly higher incidence of mutations (18/44, 41%) compared to those treated within 4 years (9/100, 9%), P<0.0001. Lack of a major cytogenetic response (MCR) was also associated with a higher likelihood of detecting a mutation; 19/50 (38%) patients without a MCR had mutations compared to 8/94 (8.5%) with an MCR, P<0.0001. In conclusion, the detection of kinase domain mutations using a direct sequencing technique was almost always associated with imatinib resistance and patients with mutations in the P-loop had a particularly poor prognosis.


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M. J. Mauro
Defining and Managing Imatinib Resistance
Hematology, January 1, 2006; 2006(1): 219 - 225.
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Cancer Res.Home page
D. J. Barnes, D. Palaiologou, E. Panousopoulou, B. Schultheis, A. S.M. Yong, A. Wong, L. Pattacini, J. M. Goldman, and J. V. Melo
Bcr-Abl Expression Levels Determine the Rate of Development of Resistance to Imatinib Mesylate in Chronic Myeloid Leukemia
Cancer Res., October 1, 2005; 65(19): 8912 - 8919.
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BloodHome page
F. Guilhot
Mutation detection in CML: is it a useful tool?
Blood, September 15, 2005; 106(6): 1897 - 1897.
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BloodHome page
S. G. Willis, T. Lange, S. Demehri, S. Otto, L. Crossman, D. Niederwieser, E. P. Stoffregen, S. McWeeney, I. Kovacs, B. Park, et al.
High-sensitivity detection of BCR-ABL kinase domain mutations in imatinib-naive patients: correlation with clonal cytogenetic evolution but not response to therapy
Blood, September 15, 2005; 106(6): 2128 - 2137.
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NEJMHome page
D. S. Krause and R. A. Van Etten
Tyrosine Kinases as Targets for Cancer Therapy
N. Engl. J. Med., July 14, 2005; 353(2): 172 - 187.
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Clin. Cancer Res.Home page
M. Golemovic, S. Verstovsek, F. Giles, J. Cortes, T. Manshouri, P. W. Manley, J. Mestan, M. Dugan, L. Alland, J. D. Griffin, et al.
AMN107, a Novel Aminopyrimidine Inhibitor of Bcr-Abl, Has In vitro Activity against Imatinib-Resistant Chronic Myeloid Leukemia
Clin. Cancer Res., July 1, 2005; 11(13): 4941 - 4947.
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JCOHome page
S. Soverini, G. Martinelli, G. Rosti, S. Bassi, M. Amabile, A. Poerio, B. Giannini, E. Trabacchi, F. Castagnetti, N. Testoni, et al.
ABL Mutations in Late Chronic Phase Chronic Myeloid Leukemia Patients With Up-Front Cytogenetic Resistance to Imatinib Are Associated With a Greater Likelihood of Progression to Blast Crisis and Shorter Survival: A Study by the GIMEMA Working Party on Chronic Myeloid Leukemia
J. Clin. Oncol., June 20, 2005; 23(18): 4100 - 4109.
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JCOHome page
J.-P. J. Issa, V. Gharibyan, J. Cortes, J. Jelinek, G. Morris, S. Verstovsek, M. Talpaz, G. Garcia-Manero, and H. M. Kantarjian
Phase II Study of Low-Dose Decitabine in Patients With Chronic Myelogenous Leukemia Resistant to Imatinib Mesylate
J. Clin. Oncol., June 10, 2005; 23(17): 3948 - 3956.
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BloodHome page
M. Deininger, E. Buchdunger, and B. J. Druker
The development of imatinib as a therapeutic agent for chronic myeloid leukemia
Blood, April 1, 2005; 105(7): 2640 - 2653.
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Mayo Clin Proc.Home page
A. Tefferi, G. W. Dewald, M. L. Litzow, J. Cortes, M. J. Mauro, M. Talpaz, and H. M. Kantarjian
Chronic Myeloid Leukemia: Current Application of Cytogenetics and Molecular Testing for Diagnosis and Treatment
Mayo Clin. Proc., March 1, 2005; 80(3): 390 - 402.
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BloodHome page
M. W. N. Deininger and T. L. Holyoake
Can we afford to let sleeping dogs lie?
Blood, March 1, 2005; 105(5): 1840 - 1841.
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BloodHome page
S. Chu, H. Xu, N. P. Shah, D. S. Snyder, S. J. Forman, C. L. Sawyers, and R. Bhatia
Detection of BCR-ABL kinase mutations in CD34+ cells from chronic myelogenous leukemia patients in complete cytogenetic remission on imatinib mesylate treatment
Blood, March 1, 2005; 105(5): 2093 - 2098.
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BloodHome page
N. von Bubnoff, D. R. Veach, H. van der Kuip, W. E. Aulitzky, J. Sanger, P. Seipel, W. G. Bornmann, C. Peschel, B. Clarkson, and J. Duyster
A cell-based screen for resistance of Bcr-Abl-positive leukemia identifies the mutation pattern for PD166326, an alternative Abl kinase inhibitor
Blood, February 15, 2005; 105(4): 1652 - 1659.
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R. L. Ilaria Jr.
Pathobiology of Lymphoid and Myeloid Blast Crisis and Management Issues
Hematology, January 1, 2005; 2005(1): 188 - 194.
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BloodHome page
M. Baccarani, G. Martinelli, G. Rosti, E. Trabacchi, N. Testoni, S. Bassi, M. Amabile, S. Soverini, F. Castagnetti, D. Cilloni, et al.
Imatinib and pegylated human recombinant interferon-{alpha}2b in early chronic-phase chronic myeloid leukemia
Blood, December 15, 2004; 104(13): 4245 - 4251.
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BloodHome page
S. Branford, Z. Rudzki, I. Parkinson, A. Grigg, K. Taylor, J. F. Seymour, S. Durrant, P. Browett, A. P. Schwarer, C. Arthur, et al.
Real-time quantitative PCR analysis can be used as a primary screen to identify patients with CML treated with imatinib who have BCR-ABL kinase domain mutations
Blood, November 1, 2004; 104(9): 2926 - 2932.
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Clin. Chem.Home page
S. Soverini, G. Martinelli, M. Amabile, A. Poerio, M. Bianchini, G. Rosti, F. Pane, G. Saglio, and M. Baccarani
Denaturing-HPLC-Based Assay for Detection of ABL Mutations in Chronic Myeloid Leukemia Patients Resistant to Imatinib
Clin. Chem., July 1, 2004; 50(7): 1205 - 1213.
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The OncologistHome page
R. M. Stone
Optimizing Treatment of Chronic Myeloid Leukemia: A Rational Approach
Oncologist, June 1, 2004; 9(3): 259 - 270.
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S. O'Brien, A. Tefferi, and P. Valent
Chronic Myelogenous Leukemia and Myeloproliferative Disease
Hematology, January 1, 2004; 2004(1): 146 - 162.
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Genes Dev.Home page
C. L. Sawyers
Opportunities and challenges in the development of kinase inhibitor therapy for cancer
Genes & Dev., December 15, 2003; 17(24): 2998 - 3010.
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NEJMHome page
J. M. Goldman and J. V. Melo
Chronic Myeloid Leukemia -- Advances in Biology and New Approaches to Treatment
N. Engl. J. Med., October 9, 2003; 349(15): 1451 - 1464.
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J. H. Antin
A 41-Year-Old Woman With Chronic Myelogenous Leukemia
JAMA, August 27, 2003; 290(8): 1083 - 1090.
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J. V. Melo, T. P. Hughes, and J. F. Apperley
Chronic Myeloid Leukemia
Hematology, January 1, 2003; 2003(1): 132 - 152.
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R. M. Braziel, M. A. Shipp, A. L. Feldman, V. Espina, M. Winters, E. S. Jaffe, E. F. Petricoin III, and L. A. Liotta
Molecular Diagnostics
Hematology, January 1, 2003; 2003(1): 279 - 293.
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