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Blood, 15 April 2004, Vol. 103, No. 8, pp. 3200-3207.
Prepublished online as a Blood First Edition Paper on December 24, 2003; DOI 10.1182/blood-2003-07-2188.


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Submitted July 2, 2003
Accepted December 6, 2003

Molecular basis for a dominant inactivation of RUNX1/AML1 by the leukemogenic inversion 16 chimera

Gang Huang, Katsuya Shigesada, Hee-Jun Wee, P Paul Liu, Motomi Osato, and Yoshiaki Ito*

Laboratory of Molecular Oncology, Institute of Molecular and Cell Biology, Singapore, Singapore; Oncology Research Institute, National University of Singapore, Singapore, Singapore
Institute for Virus Research, Kyoto University, Kyoto, Japan
National Human Genome Research Institute, National Institutes of Health, Bethesda, MD, USA

* Corresponding author; email: itoy{at}imcb.a-star.edu.sg.

The Runt domain transcription factor, PEBP2/CBF, is a heterodimer composed of two subunits. The DNA binding {alpha} subunit, or RUNX protein, interacts with a partner PEBP2{beta}/CBF{beta} through the evolutionarily conserved Runt domain. Each of the genes encoding RUNX1 and PEBP2{beta}/CBF{beta} is frequently involved in acute myeloid leukemia. The chimeric protein, CBF{beta}(PEBP2{beta})/SMMHC, is generated as a result of inversion of chromosome 16 in such a way to retain the heterodimerization domain of PEBP2{beta} at the amino-terminal side fused to the C-terminal coiled-coil region of smooth muscle myosin heavy chain (SMMHC). Here we show that, in the chimeric protein, the second heterodimerization domain is created by the fusion junction, enabling the chimeric protein to interact with RUNX1 at far greater affinity than PEBP2{beta} and inactivate the RUNX1/AML1 function. To explain why and how heterozygous CBFB/MYH11 can inactivate homozygous RUNX1 near to completion, we propose a new model for this chimeric protein that consists of a Y-shaped dimer with unpaired N-terminal halves followed by a coiled-coil for the C-terminal region.


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