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Blood, 1 May 2004, Vol. 103, No. 9, pp. 3365-3373.
Prepublished online as a Blood First Edition Paper on January 8, 2004; DOI 10.1182/blood-2003-09-3296.

Submitted September 25, 2003
Accepted November 25, 2003
Transcriptional profiling of IKK2/NF- B- and p38 MAP kinase-dependent gene expression in TNF- -stimulated primary human endothelial cells
Dorothee Viemann, Matthias Goebeler, Sybille Schmid, Kerstin Klimmek, Clemens Sorg, Stephan Ludwig, and Johannes Roth*
Experimental Dermatology, University Hospital Muenster, Muenster, Germany; Pediatrics, University Hospital Muenster, Muenster, Germany
Dermatology, University Hospital of Wuerzburg, Wuerzburg, Germany
Integrated Functional Genomics, University of Muenster, Muenster, Germany
Experimental Dermatology, University Hospital Muenster, Muenster, Germany
Institute of Molecular Medicine, Heinrich-Heine-University Duesseldorf, Duesseldorf, Germany
* Corresponding author; email: rothj{at}uni-muenster.de.
Inflammatory stimulation of endothelial cells (EC) by tumor necrosis factor (TNF- ) involves activation of NF- B and p38 MAP kinase signaling pathways. A reliable analysis of the gene expression program elicited by TNF- and its assignment to distinct signaling pathways is not available. A sophisticated analysis of oligonucleotide microarrays covering > 13,000 genes allowed definition of the TNF- -regulated endothelial gene expression profile and novel TNF- -induced genes. Virtually all TNF- -inducible genes were dependent on IKK2/NF- B activation while a minor number was additionally modulated by p38. Furthermore, genes suppressed by IKK2/NF- B were newly identified. Real-time RT-PCR and flow cytometry confirmed reliability of data. Thus, these results define a list of primary candidates for targeted modulation of endothelial functions during inflammation.

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