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Blood, 1 September 2005, Vol. 106, No. 5, pp. 1778-1785.
Prepublished online as a Blood First Edition Paper on May 19, 2005; DOI 10.1182/blood-2005-01-0143.
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Submitted January 12, 2005
Accepted April 24, 2005
Gene expression and thioguanine nucleotide disposition in acute lymphoblastic leukemia after in vivo mercaptopurine treatment
Gianluigi Zaza, Meyling Cheok, Wenjian Yang, John C Panetta, Ching-Hon Pui, Mary V Relling, and William E Evans*
Hematological Malignancies Program, St. Jude Children's Research Hospital, Memphis, TN, USA; Department of Pharmaceutical Sciences, St. Jude Children's Research Hospital, Memphis, TN, USA; University of Bari, Bari, Italy
Hematological Malignancies Program, St. Jude Children's Research Hospital, Memphis, TN, USA; Department of Pharmaceutical Sciences, St. Jude Children's Research Hospital, Memphis, TN, USA
Department of Pharmaceutical Sciences, St. Jude Children's Research Hospital, Memphis, TN, USA; University of Tennesee, Memphis, TN, USA
Hematological Malignancies Program, St. Jude Children's Research Hospital, Memphis, TN, USA; Department of Pharmaceutical Sciences, St. Jude Children's Research Hospital, Memphis, TN, USA; Hematology-Oncology, St. Jude Children's Research Hospital, Memphis, TN, USA
Hematological Malignancies Program, St. Jude Children's Research Hospital, Memphis, TN, USA; Department of Pharmaceutical Sciences, St. Jude Children's Research Hospital, Memphis, TN, USA; University of Tennesee, Memphis, TN, USA
* Corresponding author; email: william.evans{at}stjude.org.
To elucidate inter-patient variability in thioguanine nucleotide (TGN) concentrations in acute lymphoblastic leukemia (ALL) cells, we determined the TGN concentration in leukemic blasts from 82 children with newly diagnosed ALL after intravenous mercaptopurine (MP). Patients treated with MP alone, achieved higher TGN concentrations compared to those treated with the combination of methotrexate plus mercaptopurine (MTX+MP). Analysis of the expression of approximately 9,600 genes in ALL cells obtained at diagnosis identified 60 gene probes significantly associated with TGN accumulation in patients treated with MP alone and 75 gene probes in patients treated with MTX+MP, with no overlap between the two sets of genes. Genes significantly associated with intracellular TGN accumulation after MP alone, include those encoding MP metabolic enzymes and transporters (e.g., SLC29A1). Inhibition of SLC29A1 by nitrobenzylmercaptopurine ribonucleoside (NBMPR) caused a 33-45% reduction of TGN in ALL cells, in vitro (p< 0.006), consistent with the gene expression findings. Genes associated with TGN concentration, after combination therapy include genes involved in protein and ATP-biosynthesis. Together, these in vivo and in vitro data provide new insights into the genomic basis of inter-patient differences in intracellular TGN accumulation, and reveal significant differences between treatment with MP alone or in combination with MTX.

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