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Blood, 15 May 2006, Vol. 107, No. 10, pp. 4090-4100.
Prepublished online as a Blood First Edition Paper on January 19, 2006; DOI 10.1182/blood-2005-09-3778.


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Submitted September 20, 2005
Accepted January 7, 2006

Mutational analysis of PRDM1 indicates a tumor suppressor role in diffuse large B-cell lymphomas

Wayne Tam*, Mario Gomez, Amy Chadburn, Joong W Lee, Wing C Chan, and Daniel M Knowles

Department of Pathology and Laboratory Medicine, Joan & Sanford I. Weill Medical College of Cornell University, New York, NY, USA
Department of Pathology, University of Nebraska Medical Center, Omaha, Nebraska, USA

* Corresponding author; email: wtam{at}med.cornell.edu.

The PR (PRDI-BF1-RIZ) domain zinc finger protein 1 (PRDM1) is a transcription repressor with a pivotal role in plasma cell differentiation. We identified clonal inactivating mutations in PRDM1 in the diffuse large B-cell lymphoma (DLBCL) cell line OCI-Ly3 and in 8 of 35 de novo clinical DLBCL samples. The mutational spectrum consists predominantly (7 cases) of single-nucleotide mutations affecting consensus splice donor sites, some of which are recurrent, that lead to splicing aberrations and premature translation termination. In two of these cases, point mutations appear to be caused by RNA editing with G-to-A and U-to-G conversions. Other mutations include frameshift deletion and chromosomal inversion. Except for one mutant which may act as a dominant-negative, all mutations are associated with either deletion or silencing of the paired PRDM1 allele. This study identifies PRDM1 inactivation as a recurrent genetic defect in DLBCL cells and establishes PRDM1 as a potential tumor suppressor gene in DLBCL. Moreover, it implies inhibition of terminal differentiation as a pathogenetic pathway in DLBCL, particularly for the activated B-cell-like DLBCL. It also demonstrates for the first time the potential role of RNA editing in lymphomagenesis.


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