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Blood, 15 September 2000, Vol. 96, No. 6, pp. 2206-2214
IMMUNOBIOLOGY
Identification of genes specifically expressed in human activated
and mature dendritic cells through serial analysis of gene
expression
Shin-ichi Hashimoto,
Takuji Suzuki,
Shigenori Nagai,
Taro Yamashita,
Nobuaki Toyoda, and
Kouji Matsushima
From the Department of Molecular Preventive Medicine
and CREST, School of Medicine, University of Tokyo, Tokyo,
Japan.
Dendritic cells (DCs) are professional antigen-presenting cells in
the immune system and can be generated in vitro from hematopoietic progenitor cells, DC precursors, and monocytes in peripheral blood. Serial analysis of gene expression (SAGE) was conducted in
lipopolysaccharide (LPS)-stimulated mature and activated DCs (MADCs)
derived from human blood monocytes. A total of 31 837 tag sequences
from an MADC cDNA library represented 10 962 different genes, and
these data were compared with SAGE data for monocyte-derived immature DCs (IMDCs). Many of the genes, such as germinal center kinase-related protein kinase, cystatin F, interferon (IFN)- -inducible protein p27, EBI3, HEM45, actin-bundling protein, ELC, DC-LAMP,
serine/threonine kinase 4, and several genes in expressed sequence
tags, were differentially expressed in MADCs, and those encode
proteins related to cell structure, antigen-processing enzymes,
chemokines, and IFN-inducible proteins. The profile of MADCs was also
compared with that of LPS-stimulated monocytes. The Epstein-Barr
virus-induced gene 3 and IFN- -inducible protein p27 are newly
identified to be specifically and highly expressed in MADCs, but not in
LPS-stimulated monocytes. The comprehensive identification of specific
genes expressed in human IMDCs and MADCs should provide candidate genes
to define heterogeneous subsets as well as the function and maturation
stage of DCs.

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