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Blood, 15 May 2001, Vol. 97, No. 10, pp. 3226-3233
NEOPLASIA
Novel methylation targets in de novo acute myeloid leukemia with
prevalence of chromosome 11 loci
Laura J. Rush,
Zunyan Dai,
Dominic J. Smiraglia,
Xin Gao,
Fred A. Wright,
Michael Frühwald,
Joseph F. Costello,
William A. Held,
Li Yu,
Ralf Krahe,
Jonathan E. Kolitz,
Clara D. Bloomfield,
Michael A. Caligiuri, and
Christoph Plass
From the Division of Human Cancer Genetics, Department
of Molecular Virology, Immunology and Medical Genetics; the Department
of Veterinary Biosciences; the Department of Pathology; the Division of
Hematology and Oncology, Department of Internal Medicine; and the
Comprehensive Cancer Center, The Ohio State University, Columbus; the
Ludwig Institute for Cancer Research, University of California-San
Diego, La Jolla; the Department of Molecular and Cellular Biology,
Roswell Park Cancer Institute, New York, and the Don Monti Division of
Medical Oncology and Division of Hematology, North Shore University
Hospital, Manhasset, NY; and the Cancer and Leukemia Group B, Chicago
IL.
Aberrant DNA methylation is believed to be important in
tumorigenesis by causing either transcriptional inactivation of genes or chromosomal instability. Several laboratories have identified promoter hypermethylation of tumor suppressor genes in acute myeloid leukemia (AML). However, these studies do not provide a global assessment of overall methylation changes and do not allow
the identification of novel methylated sequences. Previously, nonrandom CpG island methylation was reported in 17 adult de novo AML
diagnostic samples when compared with the corresponding remission
samples by means of restriction landmark genomic scanning
(RLGS). That study has been expanded on by an analysis of a
larger set of CpG islands (1740 vs 1184), which now provides details of
33 cloned methylated loci, including 21 known genes or expressed
sequence tags. Five of these cloned loci appear to be
methylated only in AML and not in the 6 solid tumors studied in this
study (more than 98 samples analyzed). Chromosomal location was
available for 30 of the 33 loci, and 5 of these 30 (17%) are localized
to chromosome 11, suggesting a trend toward overrepresentation of methylation events on this chromosome. These results provide evidence for widespread aberrant methylation in AML, with identification of
novel methylation targets, epigenetic changes that appear unique to
AML, and apparent preferential methylation on chromosome 11.

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