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Blood, 1 November 2006, Vol. 108, No. 9, pp. 3103-3111.
Prepublished online as a Blood First Edition Paper on July 13, 2006; DOI 10.1182/blood-2006-03-011031.
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Submitted March 21, 2006
Accepted June 21, 2006
Synthetic anti-BR3 antibodies that mimic BAFF binding
and target both human and murine B cells
Chingwei V Lee, Sarah G Hymowitz, Heidi J Wallweber, Nathaniel C Gordon, Karen L Billeci, Siao-Ping Tsai, Deanne M Compaan, Jian Ping Yin, Qian Gong, Robert F Kelley, Laura E DeForge, Flavius Martin, Melissa A Starovasnik, and Germaine Fuh*
Department of Protein Engineering, Genentech Inc., San Francisco, CA, USA
Assay and Automation Technology, Genentech Inc., San Francisco, CA, USA
Department of Immunology, Genentech Inc., San Francisco, CA, USA
Department of Protein Engineering and Immunology, Genentech Inc., San Francisco, CA, USA
* Corresponding author; email: gml{at}gene.com.
BR3, expressed on all mature B cells, is a specific receptor for the B cell survival and maturation factor BAFF (B cell-activating factor belonging to the TNF family). In order to investigate the consequences of targeting BR3 in murine models and to assess the potential of BR3 antibodies as human therapeutics, synthetic antibody phage libraries were employed to identify BAFF-blocking antibodies cross-reactive to murine and human BR3, which share 52% identity in their extra-cellular domains. An antibody, CB1, was found, which exhibits ?M affinity for murine BR3, and very weak affinity for the human receptor. CB3s, an affinity-matured variant of CB1, has sub-nM affinity for BR3 from both species. Alanine scanning and crystallographic structural analysis of the CB3s/BR3 complex reveal that CB3s mimics BAFF by interacting with a similar region of the BR3 surface. Despite this similarity in binding epitopes, CB1 variants antagonize BAFF-dependent human B cell proliferation in vitro and are effective at reducing murine B cell populations in vivo, showing significant promise as therapeutics for human B-cell-mediated diseases.

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