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Blood, 15 February 2008, Vol. 111, No. 4, pp. 2238-2245.
Prepublished online as a Blood First Edition Paper on November 19, 2007; DOI 10.1182/blood-2007-06-097253.
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Submitted June 21, 2007
Accepted November 12, 2007
RNAi screening of the tyrosine kinome identifies therapeutic targets in acute myeloid leukemia
Jeffrey W Tyner, Denise K Walters, Stephanie G Willis, Mary Luttropp, Jason Oost, Marc Loriaux, Heidi Erickson, Amie S Corbin, Thomas O'Hare, Michael C Heinrich, Michael W Deininger, and Brian J Druker*
Division of Hematology and Medical Oncology, Oregon Health & Science University Cancer Institute, Portland, OR, United States
Howard Hughes Medical Institute, Portland, OR, United States
Department of Pathology, Oregon Health & Science University, Portland, OR, United States
Portland VA Medical Center, Portland, OR, United States
* Corresponding author; email: druker{at}ohsu.edu.
Despite vast improvements in our understanding of cancer genetics, a large percentage of cancer cases present without knowledge of the causative genetic events. Tyrosine kinases are frequently implicated in the pathogenesis of numerous types of cancer, but identification and validation of tyrosine kinase targets in cancer can be a time-consuming process. We report the establishment of an efficient, functional screening assay using RNAi technology to directly assess and compare the effect of individually targeting each member of the tyrosine kinase family. We demonstrate that siRNA screening can identify tyrosine kinase targets containing activating mutations in Janus kinase (JAK) 3 (A572V) in CMK cells and c-KIT (V560G) in HMC1.1 cells. In addition, this assay identifies targets that do not contain mutations, such as JAK1 and the focal adhesion kinases (FAK), that are crucial to the survival of the cancer cells. This technique, with additional development, may eventually offer the potential to match specific therapies with individual patients based on a functional assay.

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N. C. P. Cross
Hitchhikers' guide to the leukemia genome
Blood,
May 1, 2008;
111(9):
4428 - 4429.
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