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Blood, 15 February 2008, Vol. 111, No. 4, pp. 2382-2384.
Prepublished online as a Blood First Edition Paper on November 30, 2007; DOI 10.1182/blood-2007-07-103960.
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Submitted July 31, 2007
Accepted November 18, 2007
Induction of hypomethylation and molecular response after decitabine therapy in patients with chronic myelomonocytic leukemia
Yasuhiro Oki, Jaroslav Jelinek, Lanlan Shen, Hagop M Kantarjian, and Jean-Pierre J. Issa*
Department of Leukemia, University of Texas M. D. Anderson Cancer Center, Houston, TX, United States
* Corresponding author; email: jpissa{at}mdanderson.org.
Decitabine's mechanism of action in chronic myelomonocytic leukemia (CMML) remains incompletely understood. We studied the dynamics of neoplastic cell clearance during decitabine treatment (100 mg/m2/course every 4 weeks) using quantitative monitoring of mutant alleles by pyrosequencing. CMML patients were first screened for JAK2 and NPM1 mutations, and three patients with mutations were identified. Mutant allele percentages in mononuclear cell DNA were followed after treatment, along with methylation of LINE1 and ten other genes. The clearance of mutant alleles was modest after the first cycle, despite induction of hypomethylation. Delayed substantial clearance was observed after 2-4 cycles that correlated with clinical response. Two patients had complete disappearance of mutant alleles and sustained clinical remissions. In another patient, mutant allele was detectable at clinical remission, which lasted for 8 months. Our data suggest a predominantly non-cytotoxic mechanism of action for decitabine, leading to altered biology of the neoplastic clone and/or normal cells. This trial was registered at www.ClinicalTrials.gov as #NCT00067808.

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