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Blood, 12 March 2009, Vol. 113, No. 11, pp. 2375-2385. Prepublished online as a Blood First Edition Paper on December 3, 2008; DOI 10.1182/blood-2007-09-113597.
Submitted September 26, 2007
Division of Hematology/Oncology, Children's Hospital, Boston, MA, United States * Corresponding author; email: scott.armstrong{at}childrens.harvard.edu.
Leukemias that harbor translocations involving the mixed lineage leukemia gene (MLL) possess unique biological characteristics and often have an unfavorable prognosis. Gene expression analyses demonstrate a distinct profile for MLL-rearranged leukemias with consistent high-level expression of select Homeobox genes including HOXA9. Here, we investigated the effects of HOXA9 suppression in MLL-rearranged and MLL-germline leukemias utilizing RNAi. Gene expression profiling after HOXA9 suppression demonstrated co-downregulation of a program highly expressed in human MLL-AML and murine MLL-leukemia stem cells including HOXA10, MEIS1, PBX3 and MEF2C. We demonstrate that HOXA9 depletion in 17 human AML/ALL cell lines (7 MLL-rearranged, 10 MLL-germline) induces proliferation arrest and apoptosis specifically in MLL-rearranged cells (p=0.007). Similarly assessment of primary AMLs demonstrated HOXA9 suppression induces apoptosis to a greater extent in MLL-rearranged samples (p=0.01). Moreover, mice transplanted with HOXA9 depleted t(4;11) SEMK2 cells revealed a significantly lower leukemia burden thus identifying a role for HOXA9 in leukemia survival in vivo. Our data indicates an important role for HOXA9 in human MLL-rearranged leukemias, and suggests targeting HOXA9 or downstream programs may be a novel therapeutic option.
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