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Blood, 15 March 2008, Vol. 111, No. 6, pp. 2984-2990.
Prepublished online as a Blood First Edition Paper on January 8, 2008; DOI 10.1182/blood-2007-09-114082.


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Submitted September 20, 2007
Accepted December 19, 2007

Pharmacogenetics of minimal residual disease response in children with Acute Lymphoblastic Leukemia (ALL): a report from the Children's Oncology Group

Stella M Davies*, Michael J Borowitz, Gary L. Rosner, Kristin Ritz, Meenakshi Devidas, Naomi Winick, Paul L. Martin, Paul Bowman, James Elliott, Cheryl Willman, Soma Das, Edwin H. Cook, and Mary V. Relling

Dept. of Pediatrics, Cincinnati Children's Hospital and Medical Center, Cincinnati, OH
Dept of Pathology, Johns Hopkins Medical Institutions, Baltimore, MD
Dept of Biostatistics, University of Texas MD Anderson Cancer Center, Houston, TX
Statistics, Children's Oncology Group and University of Florida, Gainesville, FL
Dept of Pediatrics,, UT Southwestern Medical Center, Dallas, TX
Dept of Pediatrics, Duke University Medical Center, Durham, NC
Dept of Pediatrics, Cook Children's Medical Center, Fort Worth, TX
Dept of Pathology, New Mexico Cancer Center, Albuquerque, NM
Dept. of Psychiatry, Human Genetics and Medicine, University of Illinois in Chicago, Chicago, IL
Pharmaceutical Dept, St. Jude Children's Research Hospital, Memphis, TN

* Corresponding author; email: stella.davies{at}cchmc.org.

The presence of minimal residual disease (MRD) as a marker of antileukemic drug efficacy is being used to assess risk status and, in some cases, to adjust the intensity of therapy. Within known prognostic categories, the determinants of MRD are not yet known. We measured MRD by flow cytometry at day 8 (in blood) and at day 28 (in bone marrow) of remission induction therapy in over 1,000 children enrolled on Pediatric Oncology Group anti-metabolite based therapy protocols 9904, 9905, and 9906. We classified patients as "best risk" if they had cleared MRD by day 8 of therapy and as "worst risk" if they had MRD remaining in bone marrow at day 28, and tested whether MRD was related polymorphisms in 16 loci in genes hypothesized to influence response to therapy in ALL. After adjusting for known prognostic features such as the presence of the TEL-AML1 rearrangement, NCI risk status, ploidy and race, the G allele of a common polymorphism in chemokine receptor 5 (CCR5) was associated with a more favorable MRD status than the A allele (p = 0.009, logistic regression), when comparing "best" and "worst" risk groups. These data are consistent with the growing evidence that both acquired and host genetics influence response to cancer therapy.


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